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EMBL BioImage Data Analysis

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Yoshikatsu Sato, the head of microscope facility @NagoyaITbM presenting practicals #EMBOLivePlant https://t.co/SVrkfOKQCn
About 18 hours ago by: Kota Miura (@cmci_)

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Miyo Terao Morita showing analysis of gravitropism using centrifuge microscope they newly developed. I only know… https://t.co/Atj9E4QJAY
About 18 hours, 32 mins ago by: Kota Miura (@cmci_)

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@KeikoUTorii ... which then became the cover page of Development cell. convincing. https://t.co/XBgiqJpHog
About 19 hours, 29 mins ago by: Kota Miura (@cmci_)

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@KeikoUTorii model-based hypothesis lead to experiment results with single guard cell development or multiple >2 gu… https://t.co/oGhh4NJMPh
About 19 hours, 36 mins ago by: Kota Miura (@cmci_)

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now, @KeikoUTorii on stomata development - how very specific cell fate decisions are made, with proper spacing bet… https://t.co/XoR8tpB5WR
About 19 hours, 54 mins ago by: Kota Miura (@cmci_)

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@YvonJaillais talk on nanoclustering of ROP6, great analyses using various approaches to assess protein mobility… https://t.co/WHrzBsWTYJ
About 20 hours, 10 mins ago by: Kota Miura (@cmci_)
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Algorithm FRAP Fiji ImageJ ImageJ Plugin ImageJ Plugin 3Dviewer Imaris Java Javascript Python R added 201904 Freiburg bias blog dokuwiki fiji google imagej java libraries matlab meetings neubias news papers python references software webadmin




CMCI weblog

Published: Bioimage Data Analysis

A new book is now online: “Bioimage Data Analysis”. The instructors of EMBL Bioimage Data Analysis coauthored 10 chapters on practical techniques for analyzing image data in biology. E-books are downloadable free of charge from the following link.

Bioimage Data Analysis (2016), Wiley-VCH

Triweekly CMCI image analysis seminar launched

The CMCI seminar has been either spontaneous or took a form of mini-symposium, but now in a new format.

Every three weeks, seminar member gathers and two of them present image analysis problems / solutions or reads a paper. For more details and the schedule, see this page.

BIAS 2014 wiki page

The 2nd “EMBL Master course on BioImage Data Analysis” will be in May. I , Sebastien Tosi (Barcelona) and Perrine Paul-Gilloteaux will be organizing the course. Here is the wiki page for this year.

http://cmci.embl.de/shared/bias2014

I added biography of invited speakers, so please check if you are interested! By the way, we abbreviate the course title as “BIAS2014”.

EuBIAS 2013, Successful!

 EuBIAS 2013, Barcelona The European Bioimage Analsis Symposium (EuBIAS) 2013 ended successfully! The meeting was with many active discussions, the course impressed students, the taggathon (we invented this event) generated a new type of bioimage analysis tool aggregator Biii.info. Great developers, great analysts, great users! Community, community, community!

Nature Physics Sept. 2013 Cover Page

http://www.nature.com/nphys/journal/v9/n9/full/nphys2715.html

The ImageJ plugin "Temporal-Color Code" was used for the analysis of the contraction of actomyosin gel and now in the cover page of Nature Physics, September 2013 issue. D. L. Taylor's “Solation-Contraction Coupling” hypothesis now on the move.

http://www.nature.com/nphys/journal/v9/n9/full/nphys2715.html

Thanks to José Alvarado for his kind acknowledgement and a big applause for his successful publication!

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