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documents:120206pyip_cooking:python_imagej_cookbook [2017/04/28 23:46] – [Regular Expression to get meta information from file name] kotadocuments:120206pyip_cooking:python_imagej_cookbook [2017/12/03 13:03] – [Automatic Brightness/Contrast Button] updated github repo link kota
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 This is an expaple of using regular expression to match file names, and to collect images as a ImagePlus array then convert it to a Hyperstack.  This is an expaple of using regular expression to match file names, and to collect images as a ImagePlus array then convert it to a Hyperstack. 
  
-https://gist.github.com/cmci/6453158+https://gist.github.com/miura/6453158
  
 <code python linenums:1> <code python linenums:1>
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       - if the count is larger than "threshold", then that value is the maximum.        - if the count is larger than "threshold", then that value is the maximum. 
  
-The jython script shown below is the re-written version based on original Java code. You could see the Java code [[https://github.com/fiji/imagej/blob/master/ij/plugin/frame/ContrastAdjuster.java|in the git repo]], line 739-767+The Jython script shown below is the re-written version based on original Java code. You could see the Java code of method "autoadjust"  [[https://github.com/imagej/imagej1/blob/master/ij/plugin/frame/ContrastAdjuster.java#L780-L829|in the git repo]], line 780-829
  
 <code python linenums:1> <code python linenums:1>
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 Clone the project below, compile and install it as a plugin.  Clone the project below, compile and install it as a plugin. 
-https://github.com/cmci/GLCM2+https://github.com/miura/GLCM2
  
 <code python linenums:1> <code python linenums:1>
documents/120206pyip_cooking/python_imagej_cookbook.txt · Last modified: 2022/10/16 07:12 by kota

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