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documents:120206pyip_cooking:python_imagej_cookbook

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documents:120206pyip_cooking:python_imagej_cookbook [2018/07/19 14:43] – [Plugin: LOCI BioFormats, Replacing OME-TIFF XML] kotadocuments:120206pyip_cooking:python_imagej_cookbook [2018/08/20 01:32] – [Channel Splitter] kota
Line 772: Line 772:
 imps[0].show() # Channel 1 imps[0].show() # Channel 1
 imps[1].show() # Channel 2 imps[1].show() # Channel 2
 +</code>
 +
 +==== Channel Merge ====
 +
 +[Image > Color > Merge Channels...]
 +
 +<code python linenums:1>
 +from ij import ImagePlus
 +from ij.plugin import RGBStackMerge, RGBStackConverter
 +
 +impc1 = ImagePlus("path/to/image.tif")
 +impc2 = ImagePlus("path/to/image.tif")
 +
 +mergeimp = RGBStackMerge.mergeChannels([impc2, None, impc1, None, None, None, None], True)
 +
 +# convert the composite image to the RGB image
 +RGBStackConverter.convertToRGB(mergeimp)
 +
 +mergeimp.show()
 </code> </code>
 ==== Z projection ==== ==== Z projection ====
documents/120206pyip_cooking/python_imagej_cookbook.txt · Last modified: 2022/10/16 07:12 by kota

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