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documents:120206pyip_cooking:python_imagej_cookbook [2021/10/19 17:55] – added scijava scripting in a script kotadocuments:120206pyip_cooking:python_imagej_cookbook [2021/11/08 07:15] – added background subtraciton kota
Line 1364: Line 1364:
  
 For more explanation about this processing, see [[http://rsbweb.nih.gov/ij/developer/api/ij/plugin/filter/GaussianBlur.html|the explanation in javadoc]]. For more explanation about this processing, see [[http://rsbweb.nih.gov/ij/developer/api/ij/plugin/filter/GaussianBlur.html|the explanation in javadoc]].
 +
 +==== Background Subtraction (Rolling Ball) ====
 +
 +Menu item [Process > Subtract Background]
 +
 +<code python>
 +from ij import IJ
 +from ij.plugin.filter import BackgroundSubtracter
 +
 +imp = IJ.getImage()
 +
 +ip = imp.getProcessor()
 +radius = 50.0
 +createBackground = False
 +lightBackground = False
 +useParaboloid = False
 +doPresmooth = False
 +correctCorners = False
 +
 +bs = BackgroundSubtracter()
 +bs.rollingBallBackground(ip, radius, createBackground, lightBackground, useParaboloid, doPresmooth, correctCorners)
 +imp.updateAndDraw()
 +</code>
 +
 +If the image is in RGB, then use a different method (rollingBallBrightnessBackground​).
 +
 +For more explanation about this processing, see [[https://imagej.nih.gov/ij/developer/api/ij/ij/plugin/filter/BackgroundSubtracter.html|the explanation in javadoc]].
 ==== ImageCalculator ==== ==== ImageCalculator ====
  
documents/120206pyip_cooking/python_imagej_cookbook.txt · Last modified: 2022/10/16 07:12 by kota

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