documents:200720ijmacro_headless
Differences
This shows you the differences between two versions of the page.
documents:200720ijmacro_headless [2020/07/20 18:58] – created kota | documents:200720ijmacro_headless [2020/07/20 23:39] (current) – kota | ||
---|---|---|---|
Line 1: | Line 1: | ||
====== ImaegJ Macro Headless Limitations ====== | ====== ImaegJ Macro Headless Limitations ====== | ||
- | ===== Results Table ===== | + | There are two ways to run ImageJ " |
+ | |||
+ | 1. Real-Headless: | ||
+ | 2. Pseudo-Headless: | ||
+ | |||
+ | With the second method, you can run ImageJ macro just like you do with GUI. The speed of processing is similar to that you experience with normal GUI. With the first method, as there is no GUI drawing involved, the processing becomes much faster - but there are some problems. As some of the windows often used in ImageJ macro, such as ROI Manager and Results table cause " | ||
+ | |||
+ | There is some workaround as shown below. | ||
+ | |||
+ | ==== ROI Manager | ||
+ | |||
+ | Don't use ROI Manager in a pure-headless environment. Instead, use Overlay function like the example below. | ||
https:// | https:// | ||
Line 20: | Line 31: | ||
</ | </ | ||
- | ==== ROI Manager | + | ===== Results Table ===== |
+ | You can see the results table by saveAs(" |
documents/200720ijmacro_headless.txt · Last modified: 2020/07/20 23:39 by kota