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documents:ijcourses [2017/05/18 06:46]
kota [Basics of Image Processing and Analysis]
documents:ijcourses [2017/06/06 18:17] (current)
kota changed github user name
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 ===== Basics of Image Processing and Analysis ===== ===== Basics of Image Processing and Analysis =====
-[[https://​github.com/​cmci/​ij_textbook1/​files/​266515/​CMCIBasicCourse201102Bib.pdf|{{ :​documents:​textbooks:​textbookbasicfront.jpg?​200}}]]+[[https://​github.com/​miura/​ij_textbook1/​files/​266515/​CMCIBasicCourse201102Bib.pdf|{{ :​documents:​textbooks:​textbookbasicfront.jpg?​200}}]]
  
 [[http://​dx.doi.org/​10.5281/​zenodo.51511|DOI:​10.5281/​zenodo.51511]]\\ [[http://​dx.doi.org/​10.5281/​zenodo.51511|DOI:​10.5281/​zenodo.51511]]\\
-[[https://​github.com/​cmci/​ij_textbook1/​releases|PDF download]]+[[https://​github.com/​miura/​ij_textbook1/​releases|PDF download]]
  
 Basic course aims at biological researchers to learn basic knowledge and handling of image data using ImageJ. The textbook covers following topics: Basic course aims at biological researchers to learn basic knowledge and handling of image data using ImageJ. The textbook covers following topics:
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 To works with example images, install CMCI sample image loader plugin downloadable [[http://​cmci.embl.de/​downloads/​sampleimageloader|from this page]]. To works with example images, install CMCI sample image loader plugin downloadable [[http://​cmci.embl.de/​downloads/​sampleimageloader|from this page]].
  
-If you want to contribute to the textbook, you could fork the textbook project from its [[https://​github.com/​cmci/​ij_textbook1|github page]] and work on it. You could then request a pull to me. +If you want to contribute to the textbook, you could fork the textbook project from its [[https://​github.com/​miura/​ij_textbook1|github page]] and work on it. You could then request a pull to me. 
  
 Otherwise, if you find mistakes (I know there should be a lot), just post your suggestion as a "new issue" at Otherwise, if you find mistakes (I know there should be a lot), just post your suggestion as a "new issue" at
  
-https://​github.com/​cmci/​ij_textbook1/​issues?​state=open+https://​github.com/​miura/​ij_textbook1/​issues?​state=open
  
 ==== update log ==== ==== update log ====
-{{rss>​https://​github.com/​cmci/​ij_textbook1/​commits/​master.atom 5 date 48h}} +{{rss>​https://​github.com/​miura/​ij_textbook1/​commits/​master.atom 5 date 48h}} 
 ===== Macro Programming in ImageJ ===== ===== Macro Programming in ImageJ =====
-[[https://​github.com/​cmci/​ij_textbook2/​blob/​master/​CMCImacrocourse.pdf?​raw=true|{{ :​documents:​textbooks:​textbookmacrofront.jpg?​200}}]]+[[https://​github.com/​miura/​ij_textbook2/​blob/​master/​CMCImacrocourse.pdf?​raw=true|{{ :​documents:​textbooks:​textbookmacrofront.jpg?​200}}]]
  
  
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 To works with example images, install CMCI sample image loader plugin linked for downloadable [[http://​cmci.embl.de/​downloads/​sampleimageloader|from this page]]. To works with example images, install CMCI sample image loader plugin linked for downloadable [[http://​cmci.embl.de/​downloads/​sampleimageloader|from this page]].
  
-If you want to contribute to the textbook, you could fork the textbook project from [[https://​github.com/​cmci/​ij_textbook2|github page]] and work on it. You could then request a pull to me.  ​+If you want to contribute to the textbook, you could fork the textbook project from [[https://​github.com/​miura/​ij_textbook2|github page]] and work on it. You could then request a pull to me.  ​
  
 Otherwise, if you find mistakes (I know there should be a lot), just post your suggestion as a "new issue" at Otherwise, if you find mistakes (I know there should be a lot), just post your suggestion as a "new issue" at
  
-https://​github.com/​cmci/​ij_textbook2/​issues?​state=open+https://​github.com/​miura/​ij_textbook2/​issues?​state=open
 ==== recent updates ==== ==== recent updates ====
  
-{{rss>​https://​github.com/​cmci/​ij_textbook2/​commits/​master.atom 10 date 48h}} +{{rss>​https://​github.com/​miura/​ij_textbook2/​commits/​master.atom 10 date 48h}} 
  
 ==== syntax highlighter ==== ==== syntax highlighter ====
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 I recommend Fiji script editor for beginners to edit macro. But for those who prefer to use external editors, IJ macro syntax highlighter add-on for Vim, Notepad++(Windows) and CotEditor (OSX) are available at: I recommend Fiji script editor for beginners to edit macro. But for those who prefer to use external editors, IJ macro syntax highlighter add-on for Vim, Notepad++(Windows) and CotEditor (OSX) are available at:
  
-https://​github.com/​cmci/​ImageJMacro_Highlighter+https://​github.com/​miura/​ImageJMacro_Highlighter
  
 With Vim, the script also allows auto-completion of commands. ​ With Vim, the script also allows auto-completion of commands. ​
documents/ijcourses.txt ยท Last modified: 2017/06/06 18:17 by kota