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mainpages:courses [2016/05/24 12:46] – external edit 127.0.0.1mainpages:courses [2018/09/20 15:30] (current) – [Course Scheduling] kota
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-====== CMCI image processing and analysis courses ====== +====== Bioimage Analysis Courses ======
-Aim of the course is to shift up the level of image processing/ analysis knowledge and techniques of EMBL researchers. Three courses with different levels are available. +
  
-[[http://cmci.embl.de/documents/ijcourses|Textbooks could be downloaded from here.]]+Aim of the course is to shift up the level of image processinganalysis knowledge and techniques of participantsThree courses with different levels are availableThese courses were designed for EMBL researchers, and now as I am not the staff there anymore, I can plan one upon your request, and it will be charged for the cost
  
 +[[documents:ijcourses|Textbooks could be downloaded from here.]]
  
 ===== Requirements ===== ===== Requirements =====
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 ===== Course 1: Basics for Scientific Digital Image Processing / Analysis ===== ===== Course 1: Basics for Scientific Digital Image Processing / Analysis =====
 **Background** **Background**
-Basic knowledge on digital image processing and analysis has become indispensable in biology. On the contrary, basic training to deal with images quantitatively is not integrated. Standardized knowledge thus must be propagated as a course to all imaging beginners.+Basic knowledge on digital image processing and analysis has become indispensable in biology. On the contrary, basic training to measure image data quantitatively is not integrated well. Standardized knowledge thus must be propagated as a course to all imaging beginners.
  
 **Level**: Beginners **Level**: Beginners
  
-**Duration**: Three days, two hours each. Practical works using ImageJ will be given as assignments.+**Duration**: Three days, two hours each. Practical works using ImageJ will be given as assignments. Days are separated for students to work on assignments, and for me to check them after the deadline
    
 **Requirements**: Please bring down your own lap-top computer. **Requirements**: Please bring down your own lap-top computer.
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 **Background**\\ **Background**\\
-Routine operations can be done automatically when a program using a macro, which is equipped in most of imaging software, is written. Herewe use Fiji (plugin bundled distribution of ImageJ) to learn basics on how to write macros for semi-automatic processing of digital image files.   +Routine operations can be automated when a program using a macro, which is equipped in most of imaging software. Here we use Fiji (plugin bundled distribution of ImageJ) to learn basics on how to write macros for semi-automatic processing of digital image files. Such scripts are also becoming indispensable for securing the reproducibility of analysis. 
  
 **Level**: Intermediate **Level**: Intermediate
    
-**Duration**: Four days with  two hours each. Homework will be assigned to get used to do programming.+**Duration**: Four daystwo hours each. Homework will be assigned to get used to do programming. Days are separated for students to work on assignments, and for me to check them after the deadline
  
 **Dates**: Please contact Kota, as the course will be organized upon requests. **Dates**: Please contact Kota, as the course will be organized upon requests.
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 ===== Course Scheduling ===== ===== Course Scheduling =====
  
-[[mainpages:courses:schedulingform201006| June 2006]]+  * [[mainpages:courses:schedulingform201006| June 2006]] 
 +  * [[https://miap.eu/miap-events/miap-workshops/2018-07-imagej-vii-b/ | Freiburg, July, 2018]] 
 +  * [[mainpages:courses:Konstanz201811| Konstantz, October 2018]]
mainpages/courses.1464094015.txt.gz · Last modified: 2016/05/25 08:01 (external edit)

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