Segmentration Papers

“Gebiss: An ImageJ Plugin for the Specification of Ground Truth and the Performance Evaluation of 3D Segmentation Algorithms”
- Kriston-Vizi et al. (2011) BMC Bioinformatics 2011, 12:232doi:10.1186/1471-2105-12-232
- http://www.biomedcentral.com/1471-2105/12/232
- Drosophila nucleus segmentation tool, implemented as an ImageJ plugin. Does segmentation in 3D, semi-automated.
- plugins could be downloaded from http://imaging.bii.a-star.edu.sg/projects/gebiss/
“Comparison of segmentation algorithms for fluorescence microscopy images of cells”
- Alden A. Dima et al. (2011) Cytometry, DOI: 10.1002/cyto.a.21079
- http://onlinelibrary.wiley.com/doi/10.1002/cyto.a.21079/abstract
- meta-analysis and verification of segmentation protocol