Differences

This shows you the differences between two versions of the page.

--- downloads:particletracker2d [2012/05/22 14:25] – kota
+++ downloads:particletracker2d [2020/11/26 09:11] (current) – external edit 127.0.0.1
@@ Line 1: / Line 1: @@
-====== Particle Tracker (2D) Extended======
+===== Particle Tracker (2D) Extended=====
 [{{ :documents:downloadimg:particletracker_trajs.png?150|Particle Tracking and Using Results in ImageJ}}]
@@ Line 11: / Line 11: @@
 === recent  ===
-{{rss>https://github.com/cmci/ParticleTrackerExt/commits/master.atom 10 date 48hr}}
+{{rss>https://github.com/miura/ParticleTrackerExt/commits/master.atom 10 date 48hr}}
 === Source ===
-[[https://github.com/cmci/ParticleTrackerExt]]\\ \\
+[[https://github.com/miura/ParticleTrackerExt]]\\ \\
 ==== Installation ====
-Download [[http://cmci.embl.de/dls/ParticleTracker_.jar|ParticleTracker_.jar]] and place it in the ImageJ plugin folder.\\ \\
+Download [[https://github.com/miura/ParticleTrackerExt/blob/master/target/ParticleTracker_Mod-1.0.0.jar?raw=true]] and place it in the ImageJ plugin folder.
+By [Help > Refresh Menu] or by re-launching ImageJ, you will find new menu items under **[Plugins > Particle Tracker Classic >]**.
+(following not working at the moment 20131107)
 If you are using Fiji: Instead of installing manually, you could also set automatic download & updates by registering our update site.
 <code>
@@ Line 24: / Line 27: @@
 </code>
 For managing update site, [[http://fiji.sc/wiki/index.php/How_to_follow_a_3rd_party_update_site|see this page]].
 ==== Requires ====
 ImageJ ver 1.44h or higher ([[http://rsb.info.nih.gov/ij/upgrade/|ImageJ, upgrade page]]).\\ \\
 ==== Description ====
 ParticleTracker plugin written by Guy Levy (Computational Biophysics Lab, ETH Zurich) added with interactive export of segmentation and tracking results to ImageJ results table. [[http://weeman.inf.ethz.ch/ParticleTracker/|Original web site is HERE]]\\ \\
-<quote>
+**As of Nov. 2013, there is a [[http://mosaic.mpi-cbg.de/?q=downloads/imageJ|much up-to-date version from MOSAIC group, which also integrated the extensions I made]]. I leave this page just to keep the classic version or the particle tracker.**
+When you use this plugin, please cite:
+<blockquote>
 **I. F. Sbalzarini and P. Koumoutsakos.**\\
 **Feature point tracking and trajectory analysis for video imaging in cell biology.** \\
 J. Struct. Biol., 151(2): 182-195, 2005.\\
 [[http://www.ncbi.nlm.nih.gov/pubmed/16043363|PubMed]]
-</quote>\\
+</blockquote>\\
 ==== Work Flow ====
 [{{ :documents:downloadimg:particletracker_output.png?200|Fig. 1 ParticleTracker Results window}}]
@@ Line 114: / Line 120: @@
 }
 </sxh>
-https://github.com/cmci/ijmacros/blob/master/particleTracker2results.js
+https://github.com/miura/ijmacros/blob/master/particleTracker2results.js
 You could test this by directly executing the script by
 <code>
-jsstr =File.openUrlAsString("https://raw.github.com/cmci/ijmacros/master/particleTracker2results.js");
+jsstr =File.openUrlAsString("https://raw.github.com/miura/ijmacros/master/particleTracker2results.js");
 eval("script", jsstr);
 </code>