mainpages:courses:basiccourse_preparation
Differences
This shows you the differences between two versions of the page.
Both sides previous revisionPrevious revisionNext revision | Previous revision | ||
mainpages:courses:basiccourse_preparation [2017/06/07 03:16] – github username changed kota | mainpages:courses:basiccourse_preparation [2019/01/31 12:11] (current) – kota | ||
---|---|---|---|
Line 4: | Line 4: | ||
- Installation / Upgrading of Fiji (ImageJ). | - Installation / Upgrading of Fiji (ImageJ). | ||
- | - Download and install | + | - Install |
- | - If you have problem, | + | - If you have a problem, |
**Details: **\\ | **Details: **\\ | ||
Line 11: | Line 11: | ||
===== 1. Installation of the newest version Fiji(ImageJ). ===== | ===== 1. Installation of the newest version Fiji(ImageJ). ===== | ||
- | Please be ready with the newest Fiji installed | + | Please be ready with the newest Fiji installed |
==== INSTRUCTION ==== | ==== INSTRUCTION ==== | ||
Line 18: | Line 18: | ||
go to the Fiji download page:\\ | go to the Fiji download page:\\ | ||
- | http://fiji.sc/Downloads | + | https://imagej.net/Fiji/Downloads |
- | Download whichever fits to your OS (in all cases, download " | + | Download |
- | In Windows OS, you just need to unpack the zip file and place the folder on your Desktop. With Mac OSX, double click the .dmg file and install it as usual (copy Fiji to Application folder).\\ | + | In Windows OS, you just need to unpack the zip file and place the folder on your Desktop. With Mac OSX, double-click the .dmg file and install it as usual (copy Fiji to Application folder).\\ |
**step 2. Upgrading**\\ | **step 2. Upgrading**\\ | ||
- | Start Fiji. | + | Launch |
- | Do also [Help > Update ImageJ]. This updates the core ImageJ. | + | {{ : |
- | /* | + | If nothing is listed, just close the window because your Fiji is at the latest status. If you see the list like the image shown above, then click "Apply Changes" |
- | **step 3 Check ImageJ Version**\\ | + | |
- | restart ImageJ. In the menu, do [help -> about ImageJ...].\\ | + | |
- | If you see "ImageJ **1.44f** (or larger)" | + | |
- | */ | + | |
- | ===== 2. Downloading textbook | + | |
- | **Course Textbook** | + | You might need to restart and run the updater two times, as updater itself sometimes needs to be updated first before other things. |
- | Follow the link below, click the textbook image. Download of the textbook should then start. Depending on your preference, print out the text book and bring it along with you to the class. | ||
- | http://cmci.embl.de/ | + | ===== 2. Install plugins ===== |
- | **Plugins** | + | From the Fiji jmenu bar, select [Help > Update...] |
+ | | ||
+ | | ||
+ | | ||
+ | * Depending on the workshop program, I will ask you to install more plugins. In that case, please also tick update sites that I will tell you to install. Such as: | ||
+ | * " | ||
+ | * " | ||
+ | * After ticking required update sites, close the " | ||
+ | * Back to the " | ||
+ | |||
+ | /* | ||
Please install 5 plugins. Download a .jar or a .class file from the following links. | Please install 5 plugins. Download a .jar or a .class file from the following links. | ||
Line 58: | Line 62: | ||
Then install plugins one by one, be selecting [Plugins > Install Plugins] in the Fiji menu and choose the file you downloaded. The plugin jar file could also be dragged and dropped in the Fiji menue bar to save it in the plugin folder. | Then install plugins one by one, be selecting [Plugins > Install Plugins] in the Fiji menu and choose the file you downloaded. The plugin jar file could also be dragged and dropped in the Fiji menue bar to save it in the plugin folder. | ||
- | ===== MiSC ===== | ||
- | Please bring down power extension cable (for your laptop) for the course! Those of you with a laptop that works more than 2hours only with battery does not have to do this, but since use of the laptop is intensive during the course, the power supply often becomes problem. Bring down extension cable with multiple sockets if you could find it in your lab. | + | */ |
+ | |||
+ | ===== Optional: The Basic Course Textbook ===== | ||
+ | |||
+ | |||
+ | If you want a textbook, follow the link below and click the textbook image. Downloading of the textbook should then start. | ||
+ | |||
+ | http:// | ||
+ | |||
+ | /* | ||
+ | ===== Misc ===== | ||
+ | |||
+ | Please bring down power extension cable (for your laptop) for the course! Those of you with a laptop that works more than 2hours only with battery does not have to do this, but since the use of the laptop is intensive during the course, the power supply often becomes | ||
+ | */ |
mainpages/courses/basiccourse_preparation.1496805373.txt.gz · Last modified: 2017/06/07 03:16 by kota