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documents:101124locibioformats_bftoolstip [2010/11/24 12:50] – created kotadocuments:101124locibioformats_bftoolstip [2010/11/24 13:04] – addition kota
Line 8: Line 8:
 </code> </code>
  
 +then the output would be 
 +
 +   testS0.tif
 +   testS1.tif
 +   testS2.tif
 +   ...
 +
 +... such numbered stacks in the same directory.    
 +   
 All stacks will be extracted as tif stacks with the above command.\\ All stacks will be extracted as tif stacks with the above command.\\
 To extract only one of the stacks out of .lif file, then specify the series number: To extract only one of the stacks out of .lif file, then specify the series number:
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 bfconvert -series s laminedapi23012.lif testS%s.tif bfconvert -series s laminedapi23012.lif testS%s.tif
 </code> </code>
-if LIF file consists of stack series, each stack has multiple channels and to separate them as each tiff stack with separated channel:+ 
 +If your LIF file consists of stack series, each stack has multiple channels and you want to separate them as each tiff stack with separated channel:
 <code> <code>
 bfconvert laminedapi23012.lif testS%s_C%c.tif bfconvert laminedapi23012.lif testS%s_C%c.tif
 </code> </code>
 +
 +then the output would then be
 +
 +   testS0_C0.tif
 +   testS0_C1.tif
 +   testS0_C2.tif
 +   testS1_C0.tif
 +   ...
 +
  
  
documents/101124locibioformats_bftoolstip.txt · Last modified: 2016/05/24 12:46 by 127.0.0.1

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