public class Objects3DPopulationColocalisation
extends java.lang.Object
Constructor and Description |
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Objects3DPopulationColocalisation(Objects3DPopulation population1,
Objects3DPopulation population2)
Constructor with two populations of objects
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Modifier and Type | Method and Description |
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java.util.ArrayList<PairColocalisation> |
getAllColocalisationPairs()
Returns all the colocalisations
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int |
getColocObject(int v1,
int v2)
Return the colocalisation between two objects
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int |
getColocObject(Object3D object3D1,
Object3D object3D2)
Return the colocalisation between two objects
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int |
getColocRaw(int i1,
int i2)
Return the colocalisation between two indices (not necessarily objects values)
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java.util.ArrayList<PairColocalisation> |
getObject1ColocalisationPairs(Object3D object3D)
Returns all the colocalisations for one specific object in population 1
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java.util.ArrayList<PairColocalisation> |
getObject2ColocalisationPairs(Object3D object3D)
Returns all the colocalisations for one specific object in population 2
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ResultsTable |
getResultsTableAll(boolean useValueObject)
get the results of colocalisation as an ImageJ Results Table
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ResultsTable |
getResultsTableOnlyColoc(boolean useValueObject) |
void |
resetColocalisation()
Reset the colocalisation
In case some information changed in the populations
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public Objects3DPopulationColocalisation(Objects3DPopulation population1, Objects3DPopulation population2)
population1
- population2
- public ResultsTable getResultsTableAll(boolean useValueObject)
useValueObject
- use the original value of objects
else use incremental valuespublic ResultsTable getResultsTableOnlyColoc(boolean useValueObject)
public int getColocRaw(int i1, int i2)
i1
- index of first object in population 1i2
- index of second object in population 2public int getColocObject(Object3D object3D1, Object3D object3D2)
object3D1
- The object in population 1object3D2
- The object in population 2public int getColocObject(int v1, int v2)
v1
- The object value in population 1v2
- The object value in population 2public java.util.ArrayList<PairColocalisation> getAllColocalisationPairs()
public java.util.ArrayList<PairColocalisation> getObject1ColocalisationPairs(Object3D object3D)
object3D
- The objet in population 1public java.util.ArrayList<PairColocalisation> getObject2ColocalisationPairs(Object3D object3D)
object3D
- The objet in population 2public void resetColocalisation()