mcib3d.geom2.measurementsPopulation

Class MeasurePopulationAbstract

java.lang.Object

mcib3d.geom2.measurementsPopulation.MeasurePopulationAbstract

Direct Known Subclasses:

MeasurePopulationClosestDistance, MeasurePopulationColocalisation, MeasurePopulationDistance

public abstract class MeasurePopulationAbstract
extends java.lang.Object

Field Summary

Fields

Modifier and Type	Field and Description
protected double	defaultValue
protected java.util.Map<java.lang.String,PairObjects3DInt>	pairsValues
protected Objects3DIntPopulation	population1
protected Objects3DIntPopulation	population2

Constructor Summary

Constructors

Constructor and Description
MeasurePopulationAbstract(Objects3DIntPopulation population1, Objects3DIntPopulation population2)

Method Summary

Modifier and Type	Method and Description
protected abstract void	computePairsValues()
protected java.util.List<PairObjects3DInt>	getPairsObject1(float value)
protected java.util.List<PairObjects3DInt>	getPairsObject1(float value, boolean ascending)
protected java.util.List<PairObjects3DInt>	getPairsObject2(float value)
ResultsTable	getResultsTableOnlyColoc()
ResultsTable	getResultsTableOnlyColoc(boolean ascending)
double	getValueObjectsPair(float val1, float val2)
double	getValueObjectsPair(Object3DInt object3DInt1, Object3DInt object3DInt2)
double[]	getValuesObject1(float value)
double[]	getValuesObject1Sorted(float value, boolean ascending)
double[]	getValuesObject1String(java.lang.String value)
double[]	getValuesObject2(float value)
protected void	incrementValuePair(float val1, float val2, double increment)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

population1

protected final Objects3DIntPopulation population1

population2

protected final Objects3DIntPopulation population2

pairsValues

protected java.util.Map<java.lang.String,PairObjects3DInt> pairsValues

defaultValue

protected double defaultValue

Constructor Detail

MeasurePopulationAbstract

public MeasurePopulationAbstract(Objects3DIntPopulation population1,
                                 Objects3DIntPopulation population2)

Method Detail

computePairsValues

protected abstract void computePairsValues()

incrementValuePair

protected void incrementValuePair(float val1,
                                  float val2,
                                  double increment)

getValuesObject1String

public double[] getValuesObject1String(java.lang.String value)

getValuesObject1

public double[] getValuesObject1(float value)

getValuesObject1Sorted

public double[] getValuesObject1Sorted(float value,
                                       boolean ascending)

getValuesObject2

public double[] getValuesObject2(float value)

getPairsObject1

protected java.util.List<PairObjects3DInt> getPairsObject1(float value)

getPairsObject1

protected java.util.List<PairObjects3DInt> getPairsObject1(float value,
                                                           boolean ascending)

getPairsObject2

protected java.util.List<PairObjects3DInt> getPairsObject2(float value)

getValueObjectsPair

public double getValueObjectsPair(Object3DInt object3DInt1,
                                  Object3DInt object3DInt2)

getValueObjectsPair

public double getValueObjectsPair(float val1,
                                  float val2)

getResultsTableOnlyColoc

public ResultsTable getResultsTableOnlyColoc()

getResultsTableOnlyColoc

public ResultsTable getResultsTableOnlyColoc(boolean ascending)