@Deprecated public class FHTImage3D extends RealImage3D
Constructor and Description |
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FHTImage3D(ImageProcessor ip)
Deprecated.
Constructor for the FHTImage3D object
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FHTImage3D(ImageProcessor ip,
boolean doTransform)
Deprecated.
Constructor for the FHTImage3D object
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FHTImage3D(ImageStack stack)
Deprecated.
Constructor for the FHTImage3D object the transform is automatically
launched
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FHTImage3D(ImageStack stack,
boolean doTransform)
Deprecated.
Constructor for the FHTImage3D object
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FHTImage3D(int sizex,
int sizey,
int sizez,
boolean doTransform)
Deprecated.
Constructor for the FHTImage3D object
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Modifier and Type | Method and Description |
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void |
bandPassFilter(float rayonmincut,
float rayonminkeep,
float rayonmaxkeep,
float rayonmaxcut)
Deprecated.
Band Pass Filter
|
FHTImage3D |
center()
Deprecated.
Description of the Method
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static ImageStack |
crossCorrelation(Image3D img1,
Image3D img2)
Deprecated.
Cross Correlation 3D on Image3D
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static ImageStack |
crossCorrelation(ImageStack img1,
ImageStack img2)
Deprecated.
Cross Correlation 3D on ImageStack
|
FHTImage3D |
decenter()
Deprecated.
Description of the Method
|
FHTImage3D |
doForwardTransform()
Deprecated.
Description of the Method
|
FHTImage3D |
doInverseTransform()
Deprecated.
Description of the Method
|
FHTImage3D |
duplicate()
Deprecated.
Description of the Method
|
void |
FHT3D()
Deprecated.
Description of the Method
|
void |
fill3D(FHTImage3D[] proj,
Vector3D[] W)
Deprecated.
Fill 3D Reconstruction using central section theorem
|
double |
getAngle(int x,
int y,
int z)
Deprecated.
Gets the angle of the FHTImage3D pixel
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float |
getImag(int x,
int y,
int z)
Deprecated.
Gets the imag attribute of the FHTImage3D object
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static Voxel3D |
getMaxCorrelation(Image3D img1,
Image3D img2,
int RmaxX,
int RmaxY,
int RmaxZ)
Deprecated.
Gets the maxCorrelation attribute of the FHTImage3D class
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static Voxel3D |
getMaxCorrelation(ImageProcessor img1,
ImageProcessor img2)
Deprecated.
Gets the maxCorrelation attribute of the FHTImage3D class
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static Voxel3D |
getMaxCorrelation(ImageProcessor img1,
ImageProcessor img2,
int RmaxX,
int RmaxY)
Deprecated.
Gets the maxCorrelation attribute of the FHTImage3D class
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static Voxel3D |
getMaxCorrelation(ImageStack img1,
ImageStack img2)
Deprecated.
Gets the maxCorrelation attribute of the FHTImage3D class
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static Voxel3D |
getMaxCorrelation(ImageStack img1,
ImageStack img2,
int RmaxX,
int RmaxY,
int RmaxZ)
Deprecated.
Gets the maxCorrelation attribute of the FHTImage3D class
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double |
getNorm(int x,
int y,
int z)
Deprecated.
Gets the norm of the FHTImage3D pixel
|
ImageStack |
getPowerSpectrum()
Deprecated.
Gets the powerSpectrum attribute of the FHTImage3D object
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ImageStack |
getPowerSpectrum(boolean log)
Deprecated.
Gets the powerStack attribute of the FHTImage3D object
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float |
getReal(int x,
int y,
int z)
Deprecated.
Gets the real attribute of the FHTImage3D object
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ImageStack |
getStack()
Deprecated.
Gets the IJstack attribute of the FHTImage3D object
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static Voxel3D |
getTranslation(FHTImage3D xcorr)
Deprecated.
Gets the translation attribute of the FHTImage3D class
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static Voxel3D |
getTranslation(FHTImage3D xcorr,
int RmaxX,
int RmaxY,
int RmaxZ)
Deprecated.
Gets the translation attribute of the FHTImage3D class
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protected float |
getValue(int x,
int y,
int z)
Deprecated.
Gets the value attribute of the FHTImage3D object
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FHTImage3D |
RFilter()
Deprecated.
Description of the Method
|
FHTImage3D |
RFilter(float coeff,
boolean centre)
Deprecated.
Filtre R pour tomographie sur FFT centree
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void |
setCenter(boolean ce)
Deprecated.
Sets the center attribute of the FHTImage3D object
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FHTImage3D |
swapQuadrants()
Deprecated.
Description of the Method
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static FHTImage3D |
Xcorr(FHTImage3D fht1,
FHTImage3D fht2)
Deprecated.
Description of the Method
|
static FHTImage3D |
Xcorr(ImageProcessor img1,
ImageProcessor img2)
Deprecated.
Description of the Method
|
static FHTImage3D |
Xcorr(ImageStack img1,
ImageStack img2)
Deprecated.
Description of the Method
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void |
zeroValue(int x,
int y,
int z)
Deprecated.
Description of the Method
|
adaptiveFilter, add, add, add, addImage, addImage, addValue, applyTransform, autoApplyTransform, binarisation, centerCrop, createLocalMaximaImage, crop, dilatation3D, divideBy, erosion3D, fermeture3D, filterGeneric, getHistogram, getMaximum, getMinimum, getPix, getPix, getPix, getPixel, getPixel, getPixel, getPixelTransformedI, getPixelTransformedI, getPow2Img, getPow2Img, getTransformPixel, isLocalMaximum, maximumFilter, medianFilter, minimumFilter, multiplyBy, multiplyBy, nonLinearLaplacianFilter, ouverture3D, project, project, projection, projectionInterpolated, putPixel, putPixel, resetImage, setPix, setSizes, tophatFilter
computeMinMax, createKernelEllipsoid, crossCorrelationNormalized, extract, getCenterX, getCenterY, getCenterZ, getFloatMaximum, getFloatMinimum, getLinePixelValue, getLinePixelValue, getMaxPixel, getMean, getNbPixel, getNeighborhood, getNeighborhood, getNeighborhood3x3x3, getNeighborhoodCross3D, getNeighborhoodGrayKernelAdd, getNeighborhoodGrayKernelMinus, getNeighborhoodKernel, getNeighborhoodLayer, getNeighborhoodLayer, getNeighborhoodSphere, getNeighborhoodSphere, getPlus, getSigma, getSizex, getSizey, getSizez, getSumAbs, getType, insert, kill, radialDistribution, radialDistribution, reset, reset, setShowStatus, split
public FHTImage3D(ImageStack stack)
stack
- public FHTImage3D(ImageStack stack, boolean doTransform)
stack
- doTransform
- Description of the Parameterpublic FHTImage3D(ImageProcessor ip)
ip
- Description of the Parameterpublic FHTImage3D(ImageProcessor ip, boolean doTransform)
ip
- Description of the ParameterdoTransform
- Description of the Parameterpublic FHTImage3D(int sizex, int sizey, int sizez, boolean doTransform)
sizex
- Description of the Parametersizey
- Description of the Parametersizez
- Description of the ParameterdoTransform
- Description of the Parameterpublic static ImageStack crossCorrelation(ImageStack img1, ImageStack img2)
img1
- First IJstackimg2
- Second IJstackpublic static ImageStack crossCorrelation(Image3D img1, Image3D img2)
img1
- First Image3Dimg2
- Second Image3Dpublic static FHTImage3D Xcorr(FHTImage3D fht1, FHTImage3D fht2)
fht1
- Description of the Parameterfht2
- Description of the Parameterpublic static FHTImage3D Xcorr(ImageStack img1, ImageStack img2)
img1
- Description of the Parameterimg2
- Description of the Parameterpublic static FHTImage3D Xcorr(ImageProcessor img1, ImageProcessor img2)
img1
- Description of the Parameterimg2
- Description of the Parameterpublic static Voxel3D getMaxCorrelation(ImageProcessor img1, ImageProcessor img2)
img1
- Description of the Parameterimg2
- Description of the Parameterpublic static Voxel3D getMaxCorrelation(ImageStack img1, ImageStack img2)
img1
- Description of the Parameterimg2
- Description of the Parameterpublic static Voxel3D getMaxCorrelation(Image3D img1, Image3D img2, int RmaxX, int RmaxY, int RmaxZ)
img1
- Description of the Parameterimg2
- Description of the ParameterRmaxX
- Description of the ParameterRmaxY
- Description of the ParameterRmaxZ
- Description of the Parameterpublic static Voxel3D getMaxCorrelation(ImageStack img1, ImageStack img2, int RmaxX, int RmaxY, int RmaxZ)
img1
- Description of the Parameterimg2
- Description of the ParameterRmaxX
- Description of the ParameterRmaxY
- Description of the ParameterRmaxZ
- Description of the Parameterpublic static Voxel3D getMaxCorrelation(ImageProcessor img1, ImageProcessor img2, int RmaxX, int RmaxY)
img1
- Description of the Parameterimg2
- Description of the ParameterRmaxX
- Description of the ParameterRmaxY
- Description of the Parameterpublic static Voxel3D getTranslation(FHTImage3D xcorr, int RmaxX, int RmaxY, int RmaxZ)
xcorr
- Description of the ParameterRmaxX
- Description of the ParameterRmaxY
- Description of the ParameterRmaxZ
- Description of the Parameterpublic static Voxel3D getTranslation(FHTImage3D xcorr)
xcorr
- Description of the Parameterpublic FHTImage3D duplicate()
public ImageStack getStack()
getStack
in class RealImage3D
public ImageStack getPowerSpectrum()
public ImageStack getPowerSpectrum(boolean log)
log
- Description of the Parameterprotected float getValue(int x, int y, int z)
x
- x coordinatey
- y coordinatez
- z coordinatepublic float getReal(int x, int y, int z)
x
- x coordinatey
- y coordinatez
- z coordinatepublic double getNorm(int x, int y, int z)
x
- x coordinatey
- y coordinatez
- z coordinatepublic double getAngle(int x, int y, int z)
x
- x coordinatey
- y coordinatez
- z coordinatepublic float getImag(int x, int y, int z)
x
- x coordinatey
- y coordinatez
- z coordinatepublic FHTImage3D doForwardTransform()
public FHTImage3D doInverseTransform()
public FHTImage3D center()
public void setCenter(boolean ce)
ce
- The new center valuepublic FHTImage3D decenter()
public FHTImage3D swapQuadrants()
public void FHT3D()
public FHTImage3D RFilter()
public FHTImage3D RFilter(float coeff, boolean centre)
coeff
- Description of the Parametercentre
- Description of the Parameterpublic void bandPassFilter(float rayonmincut, float rayonminkeep, float rayonmaxkeep, float rayonmaxcut)
rayonmincut
- Description of the Parameterrayonminkeep
- Description of the Parameterrayonmaxkeep
- Description of the Parameterrayonmaxcut
- Description of the Parameterpublic void zeroValue(int x, int y, int z)
x
- Description of the Parametery
- Description of the Parameterz
- Description of the Parameterpublic void fill3D(FHTImage3D[] proj, Vector3D[] W)
proj
- Array of FFT of the projectionsW
- Orientations of the images