mcib3d.image3d.regionGrowing

Class Watershed3D

java.lang.Object

mcib3d.image3d.regionGrowing.Watershed3D

public class Watershed3D
extends java.lang.Object

Class for 3D watershed implementation, using seeds

Constructor Summary

Constructors

Constructor and Description
Watershed3D(ImageHandler image, ImageHandler seeds, double noi, int seth)
Watershed3D(ImageStack image, ImageStack seeds, double noi, int seth) Constructor for 3D Watershed

Method Summary

Modifier and Type	Method and Description
ImageHandler	getDamImage()
int	getDamValue()
ImageHandler	getRawImage() Get the raw image used
ImageHandler	getSeeds() Get the seeds image used
ImageHandler	getWatershedImage3D()
void	setAnim(boolean anim)
void	setLabelSeeds(boolean labelSeeds)
void	setLog(AbstractLog logger)
void	setRawImage(ImageHandler image) Sets the raw image
void	setSeeds(ImageInt seeds) set the seeds image used

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Watershed3D

public Watershed3D(ImageHandler image,
                   ImageHandler seeds,
                   double noi,
                   int seth)

Parameters:

image - raw image

seeds - seeds image

noi - noise level for rw image

seth - noise level for seeds

Watershed3D

public Watershed3D(ImageStack image,
                   ImageStack seeds,
                   double noi,
                   int seth)

Constructor for 3D Watershed

Parameters:

image - raw image

seeds - seeds image

noi - noise level for rw image

seth - noise level for seeds

Method Detail

getRawImage

public ImageHandler getRawImage()

Get the raw image used

Returns:

raw image

setRawImage

public void setRawImage(ImageHandler image)

Sets the raw image

Parameters:

image -

getSeeds

public ImageHandler getSeeds()

Get the seeds image used

Returns:

seeds image

setSeeds

public void setSeeds(ImageInt seeds)

set the seeds image used

Parameters:

seeds - image

setLabelSeeds

public void setLabelSeeds(boolean labelSeeds)

setAnim

public void setAnim(boolean anim)

getDamValue

public int getDamValue()

getWatershedImage3D

public ImageHandler getWatershedImage3D()

getDamImage

public ImageHandler getDamImage()

setLog

public void setLog(AbstractLog logger)