mcib_plugins.analysis

Class SimpleMeasure

java.lang.Object

mcib_plugins.analysis.SimpleMeasure

public class SimpleMeasure
extends java.lang.Object

Field Summary

Fields

Modifier and Type	Field and Description
static java.lang.String	CENTROID
static java.lang.String	DISTCENTER
static java.lang.String	ELLIPSOID
static java.lang.String	FERET
static java.lang.String	SHAPE
static java.lang.String	SURFACE
static java.lang.String	VOLUME

Constructor Summary

Constructors

Constructor and Description
SimpleMeasure(ImagePlus in)

Method Summary

Modifier and Type	Method and Description
static ImagePlus	extractCurrentStack(ImagePlus plus)
java.util.List<java.lang.Double[]>	getMeasuresCentroid()
java.util.List<java.lang.Double[]>	getMeasuresCompactness()
java.util.List<java.lang.Double[]>	getMeasuresDistanceCentreContour()
java.util.List<java.lang.Double[]>	getMeasuresEllipsoid()
java.util.List<java.lang.Double[]>	getMeasuresFeret()
java.util.List<java.lang.Double[]>	getMeasuresStats(ImageHandler raw)
java.util.List<java.lang.Double[]>	getMeasuresStats(ImagePlus myPlus)
java.util.List<java.lang.Double[]>	getMeasuresStatsHist(ImageHandler raw)
java.util.List<java.lang.Double[]>	getMeasuresStatsHist(ImagePlus myPlus)
java.util.List<java.lang.Double[]>	getMeasuresSurface()
java.util.List<java.lang.Double[]>	getMeasuresVolume()
java.util.List<java.lang.Double[]>	getMeshSurfaces() Deprecated.
ResultsTable	getResultsTable(java.lang.String measure)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

CENTROID

public static final java.lang.String CENTROID

See Also:

Constant Field Values

DISTCENTER

public static final java.lang.String DISTCENTER

See Also:

Constant Field Values

ELLIPSOID

public static final java.lang.String ELLIPSOID

See Also:

Constant Field Values

FERET

public static final java.lang.String FERET

See Also:

Constant Field Values

SHAPE

public static final java.lang.String SHAPE

See Also:

Constant Field Values

SURFACE

public static final java.lang.String SURFACE

See Also:

Constant Field Values

VOLUME

public static final java.lang.String VOLUME

See Also:

Constant Field Values

Constructor Detail

SimpleMeasure

public SimpleMeasure(ImagePlus in)

Method Detail

getMeasuresCentroid

public java.util.List<java.lang.Double[]> getMeasuresCentroid()

getMeasuresVolume

public java.util.List<java.lang.Double[]> getMeasuresVolume()

getMeasuresSurface

public java.util.List<java.lang.Double[]> getMeasuresSurface()

getMeasuresStats

public java.util.List<java.lang.Double[]> getMeasuresStats(ImageHandler raw)

getMeasuresStatsHist

public java.util.List<java.lang.Double[]> getMeasuresStatsHist(ImageHandler raw)

getMeasuresStats

public java.util.List<java.lang.Double[]> getMeasuresStats(ImagePlus myPlus)

getMeasuresStatsHist

public java.util.List<java.lang.Double[]> getMeasuresStatsHist(ImagePlus myPlus)

getMeasuresCompactness

public java.util.List<java.lang.Double[]> getMeasuresCompactness()

getMeasuresEllipsoid

public java.util.List<java.lang.Double[]> getMeasuresEllipsoid()

getMeasuresDistanceCentreContour

public java.util.List<java.lang.Double[]> getMeasuresDistanceCentreContour()

getMeasuresFeret

public java.util.List<java.lang.Double[]> getMeasuresFeret()

getMeshSurfaces

@Deprecated
public java.util.List<java.lang.Double[]> getMeshSurfaces()

Deprecated.

getResultsTable

public ResultsTable getResultsTable(java.lang.String measure)

extractCurrentStack

public static ImagePlus extractCurrentStack(ImagePlus plus)