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Timeline of @cmci_

cmci_ avatar

RT @kjaMartens: We created a very simple method to get high precision and density in spectrally-resolved single-molecule localization micro…
About 1 day, 14 hours ago by: Kota Miura (@cmci_)

cmci_ avatar

RT @random_walker: There’s a reproducibility crisis brewing in almost every scientific field that has adopted machine learning. On July 28,…
About 2 days, 3 hours ago by: Kota Miura (@cmci_)

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@AthaleLab @IISERPune @serbonline @DBTIndia @IFCPAR @OfficialSICI @boschindia Congrats Prof. Chait!
About 5 days, 16 hours ago by: Kota Miura (@cmci_)

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RT @albertcardona: Video of my #I2K2022 entry-level scripting tutorial for #ImgLib2 using the @FijiSc Script Editor: https://t.co/eastROJm0
About 1 week ago by: Kota Miura (@cmci_)

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RT @blg_journal: Biological Imaging has two current calls for papers, please share with your networks: Spatial Analysis in Biological Imag…
About 1 week, 1 day ago by: Kota Miura (@cmci_)

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This reference is also interesting. What Is the Region Occupied by a Set of Points? https://t.co/oDajYd4YCt
About 1 week, 1 day ago by: Kota Miura (@cmci_)
mainpages:courses:202009witten

Workshop: Basics of Bioimage Analysis using ImageJ

Instructor

Kota Miura (Ph.D., Bioimage Analyst)

email: kotapub@gmail.com
URL: http://wiki.cmci.info

Organizer

Wing-Kee Lee, B.Sc., Ph.D.
Assistant Professor
Institute for Physiology, Pathophysiology & Toxicology
Department of Medicine, Faculty of Health
University of Witten/Herdecke

Place and Time

Place: FEZ (großer Saal), Alfred-Herrhausen-Straße 50, 58455 Witten
Date & Time: September 24th (10:00-18:00) & 25th (9:00-17:00), 2020

Preparation

Slides will be provided to you after the workshop.

Please install Fiji and plugins in your machine. Instructions are written in the page below.

Schedule

Day 1: 24 September (Thu), 2020

Time Topic
10:00 - 11:00 Introduction
11:00 - 11:30 COFFEE BREAK
11:30 - 12:30 From Images to Numbers
12:30 - 13:30 LUNCH BREAK
13:30 - 15:30 From Numbers to Images
Multi-Dimensional Data
15:30 - 16:00 COFFEE BREAK
16:00 - 18:00 Region of Interest and Segmentation
Pre- & Post-processing for a better segmentation
How filters work, Usage of Filters

Day 2: 25 September (Fri), 2020

Time Topic
09:00 - 10:00 Measurements: Counting and Locating Dots
10:00 - 10:30 COFFEE BREAK
10:30 - 12:30 Measurements: Lengths
Measurements: Area
Measurements: Volume
12:30 - 13:30 LUNCH BREAK
13:30 - 15:00 Batch Processing
Measuring Intensity Changes
15:00 - 15:30 COFFEE BREAK
15:30 - 16:30 Measuring Position Changes: Tracking Manually
Measuring Position Changes: Tracking Automatically
16:30 - 17:00 Answering to questions posted before the workshop
mainpages/courses/202009witten.txt · Last modified: 2020/09/21 11:54 by kota