User Tools

Site Tools


Sidebar

Top
Seminar
Courses
Courses 2018
Textbooks
Documents
Downloads (-2016)
Downloads (2016-)
Weblog
RSS aggregates
Discussions
Archives


EMBL BioImage Data Analysis

EuBIAS

NEUBIAS

—- Contact
CMCI Alumni
ALMF
EMBL Heidelberg
EMBL Intranet


Popularity Ranking


Timeline of @cmci_

cmci_ avatar

Bioimage Analysis Lunch Heidelberg https://t.co/VIFKMGZ7K3
About 30 mins, 30 secs ago by: Kota Miura (@cmci_)

cmci_ avatar

RT @albertcardona: @cmci_ @LauLauThom In 2004 I wrote the "CLI", a command line interpreter for the ImageJ macro language. Its UI is the fo…
About 22 hours, 45 mins ago by: Kota Miura (@cmci_)

cmci_ avatar

Another biological world under deep earth https://t.co/J38asi2M48
About 1 day, 13 hours ago by: Kota Miura (@cmci_)

cmci_ avatar

RT @CDBMicroCore: Great summary of different visualization strategies for time-lapse data -- I need to incorporate this into my quantitativ…
About 1 day, 15 hours ago by: Kota Miura (@cmci_)

cmci_ avatar

@albertcardona @LauLauThom wow, that will be very useful. By the way, I found a thread today related to interpreter… https://t.co/IBlmlXg4tZ
About 1 day, 19 hours ago by: Kota Miura (@cmci_)

cmci_ avatar

RT @albertcardona: @cmci_ @LauLauThom Cool! By the way, I've augmented the Script Editor with an "incremental" evaluation mode: via a comma…
About 1 day, 22 hours ago by: Kota Miura (@cmci_)
mainpages:courses:basiccourse_preparation

Preparation before Coming to the basic Course

Before you come to the course, there are several things you should do by yourself.

  1. Installation / Upgrading of Fiji (ImageJ).
  2. If you have a problem, write an email to Kota.

Details:

1. Installation of the newest version Fiji(ImageJ).

Please be ready with the newest Fiji installed on your laptop. If you already have one installed, be sure to upgrade the software (see step 2). If you do not want to upgrade for whatever reason, just install the second one just for the course.

INSTRUCTION

step 1. Download Fiji (ImageJ)
go to the Fiji download page:

http://fiji.sc/Downloads

Download the latest one, whichever fits your OS.

In Windows OS, you just need to unpack the zip file and place the folder on your Desktop. With Mac OSX, double-click the .dmg file and install it as usual (copy Fiji to Application folder).

step 2. Upgrading
Launch Fiji. Do [Help → Update Fiji…]. You might need to restart and update several times, as updater itself is updated first, restart, then plugins.

Optional: The Basic Course Textbook

If you want a textbook, follow the link below and click the textbook image. Downloading of the textbook should then start.

http://cmci.embl.de/documents/ijcourses#basics_of_image_processing_and_analysis

mainpages/courses/basiccourse_preparation.txt · Last modified: 2018/09/24 04:35 by kota