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EMBL BioImage Data Analysis



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RT @rmounce: If you want to know how Elsevier produces PDFs you need to go to India: but this is also a pretty inte…
About 11 hours, 21 mins ago by: Kota Miura (@cmci_)

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RT @joachimgoedhart: My dislike of pointless p-values made it into @Nature: Please read my blog @the_Node for an ex…
About 1 day, 11 hours ago by: Kota Miura (@cmci_)

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RT @csail_alliances: Attn @MIT students! Bring your image analysis and data science skills to the 2-day Coding Chemistry hackathon w/@BASF…
About 1 day, 23 hours ago by: Kota Miura (@cmci_)

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RT @preibischs: @FritzPreusser Quite a step for @FijiSc “We also integrated the pre-trained TensorFlow model with plugins in Fiji (ImageJ)…
About 1 day, 23 hours ago by: Kota Miura (@cmci_)

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RT @googleresearch: Check out deep learning for analyzing microscopy images, especially handling out-of-focus images, using a pre-trained @…
About 1 day, 23 hours ago by: Kota Miura (@cmci_)

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RT @FritzPreusser: Google research is providing pre-trained Deep Learning networks in Fiji!
About 1 day, 23 hours ago by: Kota Miura (@cmci_)
Algorithm FRAP Fiji ImageJ ImageJ Plugin ImageJ Plugin 3Dviewer Imaris Java Javascript Python R bias blog dokuwiki fiji google imagej java libraries matlab meetings neubias news papers python references software webadmin

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BIAS2016 Pictures

google shared photos: Your contribution is more than welcomed!

Server moved

The web server hosting this wiki has moved from EMBL to InMotion. The move was rather straight forward, but as is in the subdomain, htaccess file was tweaked around to enable to stay as it is while moving only the wiki to be redirected from to

Anycase, InMotion seems to be fast enough for rendering (even though it's in US).

NeuBIAS Started!

As of May 3rd 2016, supported by COST grant, NeuBIAS officially launched for creating a stronger and broader network among bioimage analysts: read "EuBIAS Manifesto (2013, DOI:10.5281/zenodo.18047)" for more details about our initial motivation. The official document stating our activities is here (PDF)

BIAS has been a small group, and EuBIAS has been a bit larger but now with NeuBIAS, it's big!

BIAS 2016

EMBL Master Course for Bioimage Data Analysis (BIAS2016): Registration is now open, deadline on April 15th.

Official Website:

Course Wiki: BIAS2016 wiki

Published: Bioimage Data Analysis

A new book is now online: “Bioimage Data Analysis”. The instructors of EMBL Bioimage Data Analysis coauthored 10 chapters on practical techniques for analyzing image data in biology. E-books are downloadable free of charge from the following link.

Bioimage Data Analysis (2016), Wiley-VCH

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blogtng/blogtop.txt · Last modified: 2016/05/24 05:46 (external edit)