Preparation before coming to the "Basics" workshop

Preparation before coming to the "IJ Macros" workshop

• NEUBIAS Bioimage Analyst School, Jan 2018 @ Szeged
  • GitHub Page
• ZIDAS, June, 2018 @ ETH Zürich
• BIN-BW-1 MIAP, Freiburg, July, 2018
• NEUBIAS Early Investigator School, Oct 2018 @ Edinburgh
• BIN-BW-2 Konstantz, Oct. 2018
• BIN-BW-3 MIAP, Freiburg, Nov., 2018
• BIN-BW-4 Konstantz, Jan. 2019
• BIN-BW-5 Stuttgart, Feb. 2019
• NEUBIAS Bioimage Analyst School, Feb 2019 @ Luxemburg
  • GitHub Page
• BIN-BW-6 Marburg, Mar. 2019
• Image Data Integrity Workshop, Copenhagen, Mar. 2019
• BIN-BW-7 MIAP, Freiburg, Apr. 2019
  • 201904Freiburg
• BIN-BW-8 Bonn, Apr. 2019
• BIN-BW-9 Heidelberg, May. 2019
• BIN-BW-10 Konstanz, May. 2019
• ZIDAS, June, 2019 @ ETH Zürich
• MIAP, Freiburg, July, 2019
• The 5th ImageInLife Conference, Heidelberg, Sept. 2019
  • EU Horizon 2020 Marie Skłodowska-Curie European Training Network
• NEUBIAS workshop TS12 Early Career Investigators, Porto, Oct. 2019
• NEUBIAS workshop TS13 Facility Staffs, Porto, Oct. 2019
• Dresden, Nov. 2019
• Konstanz, Nov. 2019
• MIAP, Freiburg, December, 2019
• Stuttgart, Jan. 2020
• NEUBIAS workshop TS15 Bioimage Analysts, Bordeaux, Feb-Mar. 2020
• Witten, Sept. 2020

The web server hosting this wiki has moved from EMBL to InMotion. The move was rather straight forward, but as biii.info is in the subdomain, htaccess file was tweaked around to enable biii.info to stay as it is while moving only the wiki to be redirected from cmci.embl.de to cmci.info.

Anycase, InMotion seems to be fast enough for rendering (even though it's in US).

The ImageJ plugin "Temporal-Color Code" was used for the analysis of the contraction of actomyosin gel and now in the cover page of Nature Physics, September 2013 issue. D. L. Taylor's “Solation-Contraction Coupling” hypothesis now on the move.

http://www.nature.com/nphys/journal/v9/n9/full/nphys2715.html

Thanks to José Alvarado for his kind acknowledgement and a big applause for his successful publication!

I do write some scripts in R but not really serious programming. As I am interested in advanced use of R, I will be in the following course organized by Wolfgang Huber.

http://www-huber.embl.de/courses/2013-advR/

The course seems to match with my stage, as it explains

This course is designed for users who have experience with writing R scripts, and who now want to advance one step further, into producing more durable and robust software projects and code that is usable by others.

As I always have had a plan to migrate FRAPcalc program from IgorPro to R and also add some more functionalities, this course should be the one I should attend… I thank Wolfgang for his initiative in making this course available. Besides, I am happy to see another EMBL centre being active!

There will be “EMBL Master course on BioImage Data Analysis” in May, and I am preparing for this course with Christoph Moehl (Bonn) and Sebastien Tosi (Barcelona). For the course we want to be interactive so we now have a wiki for the course:

http://cmci.embl.de/shared/bias2013

We abbreviate the course title “BIAS 2013”. Registration deadline is in February, and we will be waiting for many applications!