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EMBL BioImage Data Analysis

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Timeline of @cmci_

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A Job position, KNIME! https://t.co/GmCRWDp0oH
About 2 days, 21 hours ago by: Kota Miura (@cmci_)

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RT @stelfrich: The amazing Anna Klemm from @scilifelab's BioImage Informatics Facility teaching students how to use ImageJ macros to automa…
About 2 days, 22 hours ago by: Kota Miura (@cmci_)

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RT @AssafZaritsky: Mutex Watershed: watershed + long-range repulsions --> accurate segmentation without setting parameters! Performance ass…
About 4 days, 4 hours ago by: Kota Miura (@cmci_)

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RT @Irate_Physicist: A very nice review of cell nuclear mechanics https://t.co/JLQgHLi49U
About 1 week, 1 day ago by: Kota Miura (@cmci_)

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RT @HenriquesLab: @OptNanoscopy, as promised here's the presentation I've done for #SMolBac "Democratising live-cell super-resolution micro…
About 1 week, 2 days ago by: Kota Miura (@cmci_)

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RT @embl: Today is the final day of this #EIPOD call. Don't miss the deadline if you have not completed your application yet! https://t.co/
About 1 week, 2 days ago by: Kota Miura (@cmci_)
blogtng:2011-06-17:server_imagej_launcher

Server ImageJ Launcher

For easy access to use EMBL cluster for calculation using ImageJ, I tested using Jsch, a pure SSH2 implementation in Java (http://www.jcraft.com/jsch).

I made a ImageJ launcher that runs server-side ImageJ on local desktop (see GitHub repository ServerIJ). X should be ready for hosting the GUI. For further development, interface will be more boring as only some fields to input name of shell script and some options (path name to image files, macro or scripts) will be what you will see.

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blogtng/2011-06-17/server_imagej_launcher.txt · Last modified: 2016/05/24 05:46 (external edit)