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RT @xuepan3: @palankarr @manorlaboratory Hi Raghva, We compared the results generated by IMARIS and Trackmate in ImageJ. There are some min…
About 2 days, 13 hours ago by: Kota Miura (@cmci_)

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RT @albertcardona: Plotting from your @FijiSc #python scripts, using ImageJ's internal plotting library, and with @jfreechart for prettier…
About 2 days, 14 hours ago by: Kota Miura (@cmci_)

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RT @CefapConfocal: If you struggle with image analysis, check our webpage with few ImageJ and Zen tutorials: https://t.co/9ExHi8MkL1 ps .:…
About 3 days, 10 hours ago by: Kota Miura (@cmci_)

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RT @iefforts: The cells were visualized on a Nikon AR1 or Leica SP8 confocal microscope. At least 30 cells were analysed for each condition…
About 3 days, 10 hours ago by: Kota Miura (@cmci_)

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RT @MarJungle: BigStitcher on ImageJ for 3D model reconstructions. A beta-version is available via the Fiji Updater. I am going to try this…
About 3 days, 10 hours ago by: Kota Miura (@cmci_)

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RT @ARVOtvst: New in the August issue: 25-MHz ultrasound biomicroscopy combined with #ImageJ software can be used to evaluate the opacity d…
About 3 days, 10 hours ago by: Kota Miura (@cmci_)
documents:110524java_matlab

Java - Matlab Interface

Call Matlab From Java

    • matlabcontrol is a Java API that allows for controlling and interacting with both local and remote MATLAB sessions. Local sessions are those in which the Java program has been launched from inside MATLAB. Remote sessions are those in which the Java program has been launched independently and then the Java program launches MATLAB.
    • a bit more aboutjmi.jar natively included in the native Matlab package.
  • The Official Method for generating Java package that include m file function as class method is to use MATLAB Builder JA.
    • Whether this class is usable as library is not tested. From what it looks like in the flash tutorial in the web page above, source should be modified from println out put to something else.

Call Java From Matlab

Calling external Java classes from within Matlab seems to be pretty easy.

  • general description of how-to: Calling Java from MatLab
  • A plugin MIJ developed by Daniel Sage does good job on import/export Images between Matlab and ImageJ
  • Fiji provides an m file “Miji.m” that bridges call from Matlab.
    • quote: “Daniel Sage's MIJ library to use Fiji/ImageJ from within Matlab is included with Fiji now. Just add Fiji.app/scripts/ to the search path and call Miji.”

Calling Java and Matlab from Netbeans

documents/110524java_matlab.txt · Last modified: 2016/05/24 05:46 (external edit)