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RT @NEUBIAS_COST: NEUBIAS Academy presents two webinars on KNIME for Image Processing March 4th & 11th at 15h30-17h00 CET Register now (si…
About 8 hours, 17 mins ago by: Kota Miura (@cmci_)

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RT @katpyxa: @KapiteinLukas @JurriensDaphne Also there was some help from another 3D image analysis expert https://t.co/Fbm09Hd4x8
About 8 hours, 27 mins ago by: Kota Miura (@cmci_)

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RT @haesleinhuepf: @microforum Or, consider linking, mirroring and joining https://t.co/NdXusRiqSU - it's open for collaborators 😃 Many peo…
About 1 day, 8 hours ago by: Kota Miura (@cmci_)

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@haesleinhuepf @jmutterer @nevermore_78 I made a trial. setBatchMode("hide"); (or setBatchMode(true);) at the beg… https://t.co/zcd9PGvo3Q
About 2 days, 2 hours ago by: Kota Miura (@cmci_)

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@haesleinhuepf @jmutterer @nevermore_78 Maybe use “batch mode” in behind, just to suppress them to appear on the desktop?
About 2 days, 4 hours ago by: Kota Miura (@cmci_)

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@haesleinhuepf @jmutterer @nevermore_78 Hi Robert, Great to have the markdown notebook! Just one thing: would it b… https://t.co/3aictxcfxa
About 2 days, 7 hours ago by: Kota Miura (@cmci_)
documents:120618fijijythonineclipse

Using Fiji Jython interpreter in Eclipse

Fiji has jython interpreter that allows you to do processing and analysis interactively via console. In case of using it from command line, following command launches the interactive interpreter as it is described in the Fiji website.

./ImageJ --jython

When you are developing a Fiji plugin using Eclipse, you might want to use this interactive functionality from within Eclipse. This could be done by configuring “External tools” as below. If you want to use other scripting language, you could replace the argument to –js, –jruby and so on.

documents/120618fijijythonineclipse.txt · Last modified: 2016/05/24 12:46 (external edit)