# Bioimage Analysis Wiki

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 Miyo Terao Morita showing analysis of gravitropism using centrifuge microscope they newly developed. I only know… https://t.co/Atj9E4QJAY About 27 mins, 10 secs ago by: Kota Miura (@cmci_) @KeikoUTorii ... which then became the cover page of Development cell. convincing. https://t.co/XBgiqJpHog About 1 hour, 24 mins ago by: Kota Miura (@cmci_) @KeikoUTorii model-based hypothesis lead to experiment results with single guard cell development or multiple >2 gu… https://t.co/oGhh4NJMPh About 1 hour, 31 mins ago by: Kota Miura (@cmci_) now, @KeikoUTorii on stomata development - how very specific cell fate decisions are made, with proper spacing bet… https://t.co/XoR8tpB5WR About 1 hour, 48 mins ago by: Kota Miura (@cmci_) @YvonJaillais talk on nanoclustering of ROP6, great analyses using various approaches to assess protein mobility… https://t.co/WHrzBsWTYJ About 2 hours, 4 mins ago by: Kota Miura (@cmci_) RT @haesleinhuepf: I need to add this one, because I believe in the power of beautiful data. Same optics, just earlier stage in development… About 13 hours, 36 mins ago by: Kota Miura (@cmci_)
documents:120618fijijythonineclipse

# Using Fiji Jython interpreter in Eclipse

Fiji has jython interpreter that allows you to do processing and analysis interactively via console. In case of using it from command line, following command launches the interactive interpreter as it is described in the Fiji website.

./ImageJ --jython


When you are developing a Fiji plugin using Eclipse, you might want to use this interactive functionality from within Eclipse. This could be done by configuring “External tools” as below. If you want to use other scripting language, you could replace the argument to –js, –jruby and so on.