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Timeline of @cmci_

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Miyo Terao Morita showing analysis of gravitropism using centrifuge microscope they newly developed. I only know… https://t.co/Atj9E4QJAY
About 26 mins, 3 secs ago by: Kota Miura (@cmci_)

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@KeikoUTorii ... which then became the cover page of Development cell. convincing. https://t.co/XBgiqJpHog
About 1 hour, 23 mins ago by: Kota Miura (@cmci_)

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@KeikoUTorii model-based hypothesis lead to experiment results with single guard cell development or multiple >2 gu… https://t.co/oGhh4NJMPh
About 1 hour, 30 mins ago by: Kota Miura (@cmci_)

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now, @KeikoUTorii on stomata development - how very specific cell fate decisions are made, with proper spacing bet… https://t.co/XoR8tpB5WR
About 1 hour, 47 mins ago by: Kota Miura (@cmci_)

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@YvonJaillais talk on nanoclustering of ROP6, great analyses using various approaches to assess protein mobility… https://t.co/WHrzBsWTYJ
About 2 hours, 3 mins ago by: Kota Miura (@cmci_)

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RT @haesleinhuepf: I need to add this one, because I believe in the power of beautiful data. Same optics, just earlier stage in development…
About 13 hours, 35 mins ago by: Kota Miura (@cmci_)
documents:20140715ilastikws

iLastik Mini Workshop

Title: Teach your computer to do image analysis for you

Date

Tuesday, 15/07/2014

Schedule

  • 9:00 - 10:00: Talk/demonstration of ilastik 1.0 workflows
  • 10:00 - 10.30: Coffee break
  • 10.30 - 12:00: Practical session – Get ilastik run on your own data

Instructors

ilastik team

  • Stuart Berg
  • Burcin Erocal
  • Carsten Haubold
  • Anna Kreshuk
  • Martin Schiegg
  • Chong Zhang

Organizers

  • Volker Hilsenstein
  • Christian Tischer
  • Kota Miura

Abstract: Driven by an array of new technologies (including high-throughput and high-content approaches in screening, sequencing and imaging), the life sciences are becoming increasingly quantitative. The demand for analysis of complex data sets has boosted the developments and advances of dedicated software tools to process and analyze such data quantitatively using computers.

For this, the ilastik team is organizing a demo session which aims at introducing some insights to their open source software tool ilastik in tackling biological questions. ilastik is an interactive tool using machine learning algorithms which is easy to use and freely available on http://www.ilastik.org/sfn. It is recommended to download and install the software on your own laptop in advance and bring the laptop (64bit!) to the workshop together with your own example data (file sizes < 100 MB). The practical session is a good opportunity to see what the segmentation algorithms, counting, or tracking algorithms in ilastik can achieve on your own data, with few clicks only.

Registration

documents/20140715ilastikws.txt · Last modified: 2016/05/24 05:46 (external edit)