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EMBL BioImage Data Analysis

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Timeline of @cmci_

cmci_ avatar

@EntraCod @COSTprogramme @NEUBIAS_COST Yes everyone indeed. Thanks for the suggestion.
About 1 hour, 33 mins ago by: Kota Miura (@cmci_)

cmci_ avatar

RT @SimonFlyvbjerg: Fresh off Springer's open access press: "Bioimage Data Analysis Workflows" - the book! #BioImageAnalysis https://t.co
About 6 hours, 17 mins ago by: Kota Miura (@cmci_)

cmci_ avatar

@COSTprogramme @NEUBIAS_COST Thanks to the authors and editors: @perrinepgil Sébastien Tosi Julien Colombelli… https://t.co/GVlRWoqGxr
About 6 hours, 59 mins ago by: Kota Miura (@cmci_)

cmci_ avatar

Now online, "Bioimage Data Analysis Workflow". https://t.co/stW12drKaS Thanks to the support by @COSTprogramme ,… https://t.co/pgJck70nW6
About 7 hours, 5 mins ago by: Kota Miura (@cmci_)

cmci_ avatar

RT @Datascience__: Dynamic allocation of computational resources for deep learning-enabled cellular image analysis with Kubernetes https://…
About 3 days, 7 hours ago by: Kota Miura (@cmci_)

cmci_ avatar

RT @mariana_deniz: Many thanks to the @NEUBIAS_COST instructors and organizers for an exciting and stimulating course on image analysis 😁😁…
About 3 days, 12 hours ago by: Kota Miura (@cmci_)
documents:20140715ilastikws

iLastik Mini Workshop

Title: Teach your computer to do image analysis for you

Date

Tuesday, 15/07/2014

Schedule

  • 9:00 - 10:00: Talk/demonstration of ilastik 1.0 workflows
  • 10:00 - 10.30: Coffee break
  • 10.30 - 12:00: Practical session – Get ilastik run on your own data

Instructors

ilastik team

  • Stuart Berg
  • Burcin Erocal
  • Carsten Haubold
  • Anna Kreshuk
  • Martin Schiegg
  • Chong Zhang

Organizers

  • Volker Hilsenstein
  • Christian Tischer
  • Kota Miura

Abstract: Driven by an array of new technologies (including high-throughput and high-content approaches in screening, sequencing and imaging), the life sciences are becoming increasingly quantitative. The demand for analysis of complex data sets has boosted the developments and advances of dedicated software tools to process and analyze such data quantitatively using computers.

For this, the ilastik team is organizing a demo session which aims at introducing some insights to their open source software tool ilastik in tackling biological questions. ilastik is an interactive tool using machine learning algorithms which is easy to use and freely available on http://www.ilastik.org/sfn. It is recommended to download and install the software on your own laptop in advance and bring the laptop (64bit!) to the workshop together with your own example data (file sizes < 100 MB). The practical session is a good opportunity to see what the segmentation algorithms, counting, or tracking algorithms in ilastik can achieve on your own data, with few clicks only.

Registration

documents/20140715ilastikws.txt · Last modified: 2016/05/24 05:46 (external edit)