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EMBL BioImage Data Analysis

EuBIAS

NEUBIAS

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Timeline of @cmci_

cmci_ avatar

RT @christlet: After imaging on a LEGO light-sheet with a LEGO pump, you can visualize the data in a LEGO viewer #LEGOallthethings https://…
About 3 hours, 21 mins ago by: Kota Miura (@cmci_)

cmci_ avatar

RT @jnuneziglesias: STARmap is amazing! But: Groundbreaking paper ✅ Open access ❌ Uses Ilastik ✅ Cites Ilastik ❌ Uses UMAP ✅ Cites UMAP ❌…
About 6 hours, 23 mins ago by: Kota Miura (@cmci_)

cmci_ avatar

RT @dwaithe: @sossick @BioImagingUK @NEUBIAS_COST @RoyalMicroSoc We did discuss this topic at the last #IAFIGRMS meeting but focused on cos…
About 2 days, 17 hours ago by: Kota Miura (@cmci_)

cmci_ avatar

RT @HenriquesLab: Coming back to Portugal in a couple of weeks to teach at my original research institute @IGCiencia. We'll be giving the #…
About 3 days, 1 hour ago by: Kota Miura (@cmci_)

cmci_ avatar

RT @bxv_cell: CDeep3M - Plug-and-Play cloud based deep learning for image segmentation of light, electron and X-ray microscopy https://t.co
About 3 days, 1 hour ago by: Kota Miura (@cmci_)

cmci_ avatar

RT @robustgar: New post: Small n correlations + p values = disaster https://t.co/KBgRHGCvLg https://t.co/mBe2oRb3Tk
About 3 days, 1 hour ago by: Kota Miura (@cmci_)
downloads:sampleimageloader

Course Utilities

Author

Kota Miura
Centre for Molecular and Cellular Imaging (CMCI)
EMBL Heidelberg
miura at embl dot de
Tel: +49 6221 387 404

History

  • 12-05-30 First verison
  • 12-09-21 Added course module plugins, references

recent changes

Source

Released under the GNU General Public License v2.

Requires

ImageJ ver 1.34j or higher (ImageJ, upgrade page), or Fiji.

Installation & Updating

There are two ways.

  1. Use Fiji Updater.
  2. Manually download the plugin and install.

Fiji Updater

Follow the instruction in Fiji Wiki to add “CMCI-EMBL” to your updater. The advantage of using this method over manual download & installation is that the plugin is automatically updated when I upgrade it in future.

Manual Download

Download the plugin EMBL_sampleimages-1.0.x.jar from the latest release in the following page:

https://github.com/cmci/CourseUtil/releases/

and place it in the plugin folder of ImageJ (or Fiji).

Description

This plugin adds a new menu “EMBL” in the menu bar

downloads/sampleimageloader.txt · Last modified: 2016/06/01 01:56 by kota