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EMBL BioImage Data Analysis

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Timeline of @cmci_

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RT @Allen_Institute: What makes our cells healthy and what goes wrong in disease? Our Institute for Cell Science developed open data & to…
About 4 hours, 14 mins ago by: Kota Miura (@cmci_)

cmci_ avatar

RT @plant_image: Looking for an efficient way to threshold your plants from soil in field images? Try out EasyPCC https://t.co/aJU0OlfSO3 P…
About 1 day, 11 hours ago by: Kota Miura (@cmci_)

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RT @plant_image: ACA is a new tool to quantify colour changes in rosette plants. Run on #imagej, #R and #shiny. https://t.co/FKWEFP8yuN htt…
About 1 day, 11 hours ago by: Kota Miura (@cmci_)

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RT @haesleinhuepf: @ctrueden showing WIP on ImageJ search: search plugins, forum and wiki at a time. Extend with own search plugins! #GameC…
About 2 days, 2 hours ago by: Kota Miura (@cmci_)

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This is why one should measure microscope images. https://t.co/O3snm0nZcA
About 3 days ago by: Kota Miura (@cmci_)

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RT @PavelTomancak: Data volumes of Cryo-EM is entering the petabyte range #Kudryashev #MIC2017 #datatsunami
About 3 days, 5 hours ago by: Kota Miura (@cmci_)
downloads:sampleimageloader

Course Utilities

Author

Kota Miura
Centre for Molecular and Cellular Imaging (CMCI)
EMBL Heidelberg
miura at embl dot de
Tel: +49 6221 387 404

History

  • 12-05-30 First verison
  • 12-09-21 Added course module plugins, references

recent changes

Source

Released under the GNU General Public License v2.

Requires

ImageJ ver 1.34j or higher (ImageJ, upgrade page), or Fiji.

Installation & Updating

There are two ways.

  1. Use Fiji Updater.
  2. Manually download the plugin and install.

Fiji Updater

Follow the instruction in Fiji Wiki to add “CMCI-EMBL” to your updater. The advantage of using this method over manual download & installation is that the plugin is automatically updated when I upgrade it in future.

Manual Download

Download the plugin EMBL_sampleimages-1.0.x.jar from the latest release in the following page:

https://github.com/cmci/CourseUtil/releases/

and place it in the plugin folder of ImageJ (or Fiji).

Description

This plugin adds a new menu “EMBL” in the menu bar

downloads/sampleimageloader.txt · Last modified: 2016/06/01 01:56 by kota