User Tools

Site Tools


Sidebar

Top
Profile
Freelancing
Seminar
Courses -2016
Courses 2018-
Textbooks
Documents
Downloads (-2016)
Downloads (2016-)
Weblog
RSS aggregates
Discussions
Archives
日本語


EMBL BioImage Data Analysis

EuBIAS

NEUBIAS

—- Contact
CMCI Alumni
ALMF
EMBL Heidelberg
EMBL Intranet


Popularity Ranking


Timeline of @cmci_

cmci_ avatar

RT @StifelCenter: A visual programming language for ImageJ that allows to create macros without any programming by just creating a flowchar…
About 1 week, 5 days ago by: Kota Miura (@cmci_)

cmci_ avatar

@naba_chatterjee @haesleinhuepf I'm afraid not
About 1 week, 6 days ago by: Kota Miura (@cmci_)

cmci_ avatar

Symposium Programme 2023: BioImage Data Analysis: Tools & Workflows in Life Sciences Deep Learning for Image Data… https://t.co/ZfjtsDdyFK
About 1 week, 6 days ago by: Kota Miura (@cmci_)

cmci_ avatar

Training School 2023 Introduction to bioimage analysis, tools, and workflows FAIR principles Cloud-hosted image da… https://t.co/FnzmoxI2Eb
About 1 week, 6 days ago by: Kota Miura (@cmci_)

cmci_ avatar

IN-PERSON #NEUBIAS training school and symposium! Deadline for the Training school on Wednesday... sorry for this b… https://t.co/8rbitWsBka
About 1 week, 6 days ago by: Kota Miura (@cmci_)

cmci_ avatar

RT @BertrandVernay: Beautiful 3D dataset; One of them is going to find its way to our @RISE_micro "Introduction to image processing and ana…
About 2 weeks, 3 days ago by: Kota Miura (@cmci_)
mainpages:courses:macrocourse_preparation

Preparation before Coming to the Macro Course

Before you come to the course please:

  1. Install the newest version Fiji.
  2. Download textbook.
  3. If you have problem, call Kota (ex 8404).

Details:

1. Installation of Fiji.

Fiji is a plugin-bundled distribution of ImageJ. We use this because scripting editor function is excellent.
If you already have Fiji in your machine, just do the step 2.

INSTRUCTION


step 1. Download and install Fiji

Depending on the OS of your laptop, Consult either Windows, MacOSX or Linux page.

step 2. Upgrading
Start Fiji (described in above links). If your Fiji is not in the latest condition, Fiji automatically asks you to update the program. If you see that dialog, just accept. After updating is finished, close Fiji once, restart.

Now, Do [Help → Update Fiji…]. This may invoke another round of updating. Repeat this process until everything is up-to-date.

Lastly, check if the core ImageJ file is updated. [Help > Update ImageJ]. If you see “You are running v1.47d”, then your imageJ is the latest stable version so you could cancel. Otherwise, you should click “OK”.

2. Downloading course textbook

Textbook PDF could be downloaded from here. Right click (win) or control-click (mac) the image and save the file in your local disk.

For those who are more comfortable with printed textbook, please print it by yourself.

Misc

Please bring down power extension cable (for your laptop) for the course! Those of you with PC working without external supply for more than 2hours will be ok without. Since each of you use laptop full time during the course, its always that the power supply becomes problem. Bring down extension cable with multiple sockets if you could find it in your lab.

mainpages/courses/macrocourse_preparation.txt · Last modified: 2016/05/24 12:46 (external edit)