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Hierarchy For All Packages
Package Hierarchies:
mcib_plugins
,
mcib_plugins.analysis
,
mcib_plugins.Filter3D
,
mcib_plugins.processing
,
mcib_plugins.segmentation
,
mcib_plugins.tools
,
mcib3d.align
,
mcib3d.Classification
,
mcib3d.ext
,
mcib3d.geom
,
mcib3d.geom.deformation3d
,
mcib3d.geom.interactions
,
mcib3d.image3d
,
mcib3d.image3d.comparator
,
mcib3d.image3d.distanceMap3d
,
mcib3d.image3d.IterativeThresholding
,
mcib3d.image3d.legacy
,
mcib3d.image3d.processing
,
mcib3d.image3d.regionGrowing
,
mcib3d.Jama
,
mcib3d.Jama.test
,
mcib3d.Jama.util
,
mcib3d.spatial.analysis
,
mcib3d.spatial.descriptors
,
mcib3d.spatial.sampler
,
mcib3d.tracking_dev
,
mcib3d.utils
,
mcib3d.utils.Logger
Class Hierarchy
java.lang.Object
mcib_plugins.
About
mcib3d.utils.Logger.
AbstractLog
mcib3d.utils.Logger.
IJLog
mcib3d.utils.Logger.
IJStatus
mcib3d.utils.Logger.
NoLog
mcib3d.utils.Logger.
TextLog
javax.swing.table.AbstractTableModel (implements java.io.Serializable, javax.swing.table.TableModel)
mcib_plugins.tools.
ResultsTableModel
mcib3d.align.
Align2D
mcib3d.align.
Align3D
mcib3d.image3d.regionGrowing.
AllRegionsAssociation
mcib3d.image3d.regionGrowing.
Cluster
mcib3d.utils.
ArrayUtil
mcib3d.utils.
HistogramUtil
mcib3d.tracking_dev.
Association
mcib_plugins.
Association_
mcib3d.tracking_dev.
Association_Track_Plugin
mcib_plugins.
Association_Tracking
mcib3d.tracking_dev.
AssociationPair
mcib3d.image3d.regionGrowing.
AssociationRegion
mcib3d.Classification.
Attributes
mcib3d.image3d.IterativeThresholding.
BestCriteriaMax
(implements mcib3d.image3d.IterativeThresholding.
BestCriterion
)
mcib3d.image3d.IterativeThresholding.
BestCriteriaMin
(implements mcib3d.image3d.IterativeThresholding.
BestCriterion
)
mcib3d.image3d.IterativeThresholding.
BestCriteriaStable
(implements mcib3d.image3d.IterativeThresholding.
BestCriterion
)
mcib_plugins.
Binary_Close
mcib_plugins.
Binary_Interpolator
mcib_plugins.processing.
Binary_Open
mcib_plugins.
BinaryInterpolator
mcib3d.image3d.processing.
BinaryMorpho
mcib_plugins.
Canny_Symmetry
mcib3d.image3d.processing.
CannyDeriche1D
mcib3d.image3d.processing.
CannyEdge3D
mcib3d.utils.
CDFTools
mcib3d.utils.
CheckInstall
mcib3d.Jama.
CholeskyDecomposition
(implements java.io.Serializable)
mcib3d.utils.
Chrono
mcib3d.Classification.
Classifier
mcib3d.image3d.distanceMap3d.
CleanUpLocalThickness
mcib3d.image3d.legacy.
ColorImage3D
mcib3d.geom.
ComparatorBorderDistance
(implements java.util.Comparator<T>)
mcib3d.image3d.comparator.
ComparatorByte
(implements java.util.Comparator<T>)
mcib3d.image3d.comparator.
ComparatorFloat
(implements java.util.Comparator<T>)
mcib3d.image3d.comparator.
ComparatorInvByte
(implements java.util.Comparator<T>)
mcib3d.image3d.comparator.
ComparatorInvFloat
(implements java.util.Comparator<T>)
mcib3d.image3d.comparator.
ComparatorInvShort
(implements java.util.Comparator<T>)
mcib3d.image3d.IterativeThresholding.
ComparatorObjectTrack
(implements java.util.Comparator<T>)
mcib3d.image3d.comparator.
ComparatorShort
(implements java.util.Comparator<T>)
mcib3d.geom.
ComparatorVoxel
(implements java.util.Comparator<T>)
java.awt.Component (implements java.awt.image.ImageObserver, java.awt.MenuContainer, java.io.Serializable)
java.awt.Container
java.awt.Window (implements javax.accessibility.Accessible)
java.awt.Frame (implements java.awt.MenuContainer)
javax.swing.JFrame (implements javax.accessibility.Accessible, javax.swing.RootPaneContainer, javax.swing.WindowConstants)
mcib3d.utils.
AboutMCIB
mcib3d.image3d.processing.
ManualSpot
mcib_plugins.tools.
ResultsFrame
(implements java.awt.event.ActionListener)
mcib_plugins.tools.
RoiManager3D_2
(implements java.awt.event.AdjustmentListener, java.awt.dnd.DropTargetListener, java.awt.event.MouseWheelListener, java.awt.event.WindowListener)
mcib_plugins.
Convex_Hull3D
mcib3d.image3d.
Coordinate3D
mcib3d.tracking_dev.
CostColoc2
(implements mcib3d.tracking_dev.
AssociationCost
)
mcib3d.tracking_dev.
CostColocalisation
(implements mcib3d.tracking_dev.
AssociationCost
)
mcib3d.tracking_dev.
CostPairMitosis
(implements mcib3d.tracking_dev.
AssociationCost
)
mcib3d.tracking_dev.
CostTouching
(implements mcib3d.tracking_dev.
AssociationCost
)
mcib3d.image3d.IterativeThresholding.
CriterionClassification
(implements mcib3d.image3d.IterativeThresholding.
Criterion
)
mcib3d.image3d.IterativeThresholding.
CriterionCompactness
(implements mcib3d.image3d.IterativeThresholding.
Criterion
)
mcib3d.image3d.IterativeThresholding.
CriterionEdge
(implements mcib3d.image3d.IterativeThresholding.
Criterion
)
mcib3d.image3d.IterativeThresholding.
CriterionElongation
(implements mcib3d.image3d.IterativeThresholding.
Criterion
)
mcib3d.image3d.IterativeThresholding.
CriterionVolume
(implements mcib3d.image3d.IterativeThresholding.
Criterion
)
mcib_plugins.
Crop3D_
mcib_plugins.
Crop3D_All
mcib3d.Classification.
Data
mcib3d.Classification.
DataSet
mcib3d.image3d.processing.
Density3D
mcib_plugins.
Density3D_
mcib3d.geom.deformation3d.
Deriche
mcib3d.image3d.distanceMap3d.
DistanceRidge
mcib_plugins.
Distances_
mcib_plugins.tools.
Draw_RoiSlices
mcib3d.image3d.distanceMap3d.
EDT
mcib3d.image3d.distanceMap3d.
EDT_1D
mcib_plugins.
EDT_3D
mcib3d.image3d.distanceMap3d.
EdtByte
mcib3d.image3d.distanceMap3d.
EdtByteInv
mcib3d.image3d.distanceMap3d.
EdtFloat
mcib3d.image3d.distanceMap3d.
EdtFloatInv
mcib3d.image3d.distanceMap3d.
EdtShort
mcib3d.image3d.distanceMap3d.
EdtShortInv
mcib3d.image3d.distanceMap3d.
EdtShortLabel
mcib3d.Jama.
EigenvalueDecomposition
(implements java.io.Serializable)
mcib_plugins.
Ellipsoids_3D
mcib_plugins.
EVF_Radial
mcib3d.utils.
exceptionPrinter
mcib3d.spatial.descriptors.
F_Function
(implements mcib3d.spatial.descriptors.
SpatialDescriptor
)
mcib_plugins.
Fast_filters3D
mcib3d.image3d.processing.
FastArithmetic3D
mcib3d.image3d.processing.
FastFilters3D
mcib3d.image3d.processing.
FastOperation3D
mcib_plugins.
Fill_Holes3D
mcib3d.image3d.processing.
FillHoles3D
mcib_plugins.Filter3D.
Filter3Ddefault
mcib_plugins.Filter3D.
Filter3Dmax
mcib_plugins.Filter3D.
Filter3DmaxLocal
mcib_plugins.Filter3D.
Filter3Dmean
mcib_plugins.Filter3D.
Filter3Dmin
mcib_plugins.Filter3D.
Filter3Ddefault.Voxel_value
mcib_plugins.
Filters3d_jni
mcib3d.image3d.processing.
Flood3D
mcib3d.spatial.descriptors.
G_Border
(implements mcib3d.spatial.descriptors.
SpatialDescriptor
)
mcib3d.spatial.descriptors.
G_Function
(implements mcib3d.spatial.descriptors.
SpatialDescriptor
)
mcib3d.geom.
GeomTransform3D
mcib_plugins.analysis.
GLCMTexture
mcib3d.geom.
Gradient
mcib3d.geom.
GradientPoint
mcib3d.spatial.descriptors.
H_Border
(implements mcib3d.spatial.descriptors.
SpatialDescriptor
)
mcib3d.spatial.descriptors.
H_Function
(implements mcib3d.spatial.descriptors.
SpatialDescriptor
)
mcib3d.tracking_dev.
HungarianAlgorithm
mcib_plugins.
Hysteresis_Thresholding
mcib3d.image3d.legacy.
Image3D
mcib3d.image3d.legacy.
IntImage3D
mcib3d.image3d.legacy.
RealImage3D
mcib3d.image3d.legacy.
FHTImage3D
mcib3d.image3d.processing.
ImageColocalizer
mcib3d.image3d.
ImageHandler
mcib3d.image3d.
ImageFloat
mcib3d.image3d.
ImageInt
mcib3d.image3d.
ImageByte
mcib3d.image3d.
BlankMask
mcib3d.image3d.
ImageShort
mcib3d.image3d.
ImageLabeller
mcib3d.image3d.
ImageLabeller.Spot3D
mcib3d.image3d.
ImageLabeller.Vox3D
mcib3d.image3d.
ImageLabeller2D
mcib3d.image3d.
ImageLabeller2D.Spot2D
mcib3d.image3d.
ImageLabeller2D.Vox2D
mcib3d.image3d.
ImagePlus_Utils
mcib3d.image3d.
ImageStats
mcib3d.ext.
Imod
mcib3d.ext.
ImodConf
mcib3d.geom.
IntCoord3D
mcib3d.geom.interactions.
Interactions
mcib_plugins.
Interactions_
mcib3d.geom.interactions.
InteractionsComputeContours
(implements mcib3d.geom.interactions.
InteractionsCompute
)
mcib3d.geom.interactions.
InteractionsComputeDamLines
(implements mcib3d.geom.interactions.
InteractionsCompute
)
mcib3d.geom.interactions.
InteractionsComputeDilate
(implements mcib3d.geom.interactions.
InteractionsCompute
)
mcib3d.geom.interactions.
InteractionsComputeVoronoi
(implements mcib3d.geom.interactions.
InteractionsCompute
)
mcib3d.geom.interactions.
InteractionsList
mcib3d.geom.deformation3d.
IO
mcib3d.spatial.descriptors.
K_Function
(implements mcib3d.spatial.descriptors.
SpatialDescriptor
)
mcib3d.utils.
KDTreeC
mcib3d.utils.
KDTreeC.Item
mcib_plugins.Filter3D.
Kernel3D
mcib_plugins.
Line3D_
mcib3d.image3d.distanceMap3d.
LocalThickness
mcib_plugins.processing.
LoG3D
mcib3d.Jama.
LUDecomposition
(implements java.io.Serializable)
mcib_plugins.tools.
Manager3DMeasurements
mcib_plugins.segmentation.
Manual_Spot
mcib3d.image3d.
MaskIterator
mcib3d.Jama.util.
Maths
mcib3d.Jama.
Matrix
(implements java.lang.Cloneable, java.io.Serializable)
mcib3d.image3d.processing.
MaximaFinder
mcib_plugins.
MaximaFinder3D_
mcib_plugins.
Mereo_3D
mcib3d.geom.
MereoAnalysis
mcib3d.geom.
MereoObject3D
mcib3d.geom.deformation3d.
Mesh
mcib3d.geom.
MeshEditor
mcib3d.utils.
Message
mcib3d.tracking_dev.
Mitosis
mcib3d.tracking_dev.
MitosisDetector
mcib_plugins.
Multi_Coloc
mcib_plugins.
Numbering_
mcib3d.geom.
Object3D
(implements java.lang.Comparable<T>)
mcib3d.geom.
Object3DLabel
mcib3d.geom.
Object3DSurface
mcib3d.geom.deformation3d.
DeformableMesh
mcib3d.geom.
Object3DVoxels
mcib3d.geom.
Object3DFuzzy
mcib3d.geom.
Object3DPoint
mcib3d.geom.
Object3D_IJUtils
mcib3d.geom.
Object3DFactory
mcib3d.geom.
Object3DFactory.ObjectValueComparator
(implements java.util.Comparator<T>)
mcib_plugins.
ObjectCreator_
mcib3d.geom.
ObjectCreator3D
mcib3d.geom.
ObjectDistBB
mcib3d.geom.
Objects3DPopulation
mcib3d.geom.
Objects3DPopulationAnalysis
mcib3d.geom.
Objects3DPopulationColocalisation
mcib3d.geom.
Objects3DPopulationInteractions
mcib3d.geom.
ObjectsPopulationDistances
mcib3d.image3d.IterativeThresholding.
ObjectTrack
mcib3d.geom.
PairColocalisation
PlugInFrame
mcib_plugins.
ConnectionThresholding_
(implements java.awt.event.ActionListener, java.awt.event.AdjustmentListener, java.awt.event.ItemListener, java.lang.Runnable)
mcib3d.geom.
Point3D
mcib3d.geom.
Vector3D
mcib3d.geom.
Voxel3D
(implements java.lang.Comparable<T>)
mcib3d.geom.
Voxel3DComparable
mcib3d.geom.
Point3DInt
mcib3d.Jama.
QRDecomposition
(implements java.io.Serializable)
mcib_plugins.
Radial_3D
mcib3d.geom.
RDAR
mcib_plugins.
RDAR_
mcib_plugins.
RemoveObjectsBorder_
mcib_plugins.tools.
RoiManager3D_Options
mcib_plugins.
SeedSpots_Plus
mcib_plugins.
Segment3D_
mcib3d.image3d.
Segment3DImage
mcib3d.image3d.
Segment3DSpots
mcib_plugins.segmentation.
SegNuclei
mcib_plugins.
segNuclei_
mcib_plugins.
Shape3D_
mcib3d.utils.
Shell
mcib_plugins.
Simple_Dist_Analysis
mcib_plugins.
Simple_MeasureCentroid
mcib_plugins.
Simple_MeasureGeometrical
mcib_plugins.
Simple_MeasureMesh
mcib_plugins.
Simple_MeasureShape
mcib_plugins.
Simple_MeasureStatistics
mcib_plugins.analysis.
simpleMeasure
mcib3d.Jama.
SingularValueDecomposition
(implements java.io.Serializable)
mcib_plugins.analysis.
spatialAnalysis
mcib3d.spatial.sampler.
SpatialRandom
(implements mcib3d.spatial.sampler.
SpatialModel
)
mcib3d.spatial.sampler.
SpatialRandomHardCore
(implements mcib3d.spatial.sampler.
SpatialModel
)
mcib3d.spatial.sampler.
SpatialShuffle
(implements mcib3d.spatial.sampler.
SpatialModel
)
mcib3d.spatial.analysis.
SpatialStatistics
mcib3d.utils.
StackFolderOpener
mcib_plugins.
Stats_Spat3D
mcib3d.image3d.processing.
SymmetryFilter
mcib3d.Jama.test.
TestMatrix
mcib3d.utils.
ThreadRunner
mcib3d.utils.
ThreadUtil
mcib_plugins.processing.
Thresholder
mcib_plugins.
Track_Threshold
mcib3d.tracking_dev.
TrackingAssociation
mcib3d.image3d.IterativeThresholding.
TrackThreshold
mcib3d.geom.deformation3d.
Triangle
mcib3d.geom.deformation3d.
Vertex
mcib3d.geom.
Viewer3D_Utils
mcib3d.image3d.distanceMap3d.
VoxEVF
(implements java.lang.Comparable<T>)
mcib_plugins.
Watershed_3D
mcib_plugins.
Watershed_Split3D
mcib_plugins.
Watershed_Voronoi3D
mcib3d.image3d.regionGrowing.
Watershed3D
mcib3d.image3d.regionGrowing.
Watershed3D_old
mcib3d.image3d.regionGrowing.
RegionGrowing
mcib3d.image3d.regionGrowing.
Watershed3DVoronoi
mcib3d.ext.
Xmipp
mcib3d.ext.
XmippConf
Interface Hierarchy
mcib3d.tracking_dev.
AssociationCost
mcib3d.image3d.IterativeThresholding.
BestCriterion
mcib3d.image3d.IterativeThresholding.
Criterion
mcib3d.geom.interactions.
InteractionsCompute
mcib3d.spatial.descriptors.
SpatialDescriptor
mcib3d.spatial.sampler.
SpatialModel
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